37 items (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106587501	Proteasome subunit alpha type. (262 aa)
	LOC106611935	Spondin-2-like. (330 aa)
	LOC106610672	Platelet-activating factor receptor-like; Belongs to the G-protein coupled receptor 1 family. (372 aa)
	sr-bi	Scavenger receptor class B type I isoform X1; Belongs to the CD36 family. (531 aa)
	ENSSSAP00000010801	Ninjurin 2. (124 aa)
	LOC106609833	Ninjurin-2-like. (129 aa)
	LOC106566615	Ninjurin-1-like. (138 aa)
	ENSSSAP00000017996	Platelet-activating factor receptor-like. (371 aa)
	LOC106562016	Platelet-activating factor receptor-like; Belongs to the G-protein coupled receptor 1 family. (386 aa)
	PSA1	Proteasome subunit alpha type. (262 aa)
	LOC106584427	Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3. (606 aa)
	LOC106604923	Spondin-2-like. (330 aa)
	LOC106588338	Proteasome subunit beta; Belongs to the peptidase T1B family. (257 aa)
	LOC106587117	Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family. (622 aa)
	LOC106571387	Podocan-like. (503 aa)
	LOC106565158	Ninjurin-1-like. (143 aa)
	drosha	Ribonuclease 3 isoform X1. (1437 aa)
	LOC106588859	TLR4 interactor with leucine rich repeats-like. (864 aa)
	LOC106561070	Proteasome subunit alpha type-1. (278 aa)
	ENSSSAP00000067924	Spondin 2b, extracellular matrix protein. (271 aa)
	LOC106613778	Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3. (606 aa)
	spon2	Spondin-2 precursor. (422 aa)
	ENSSSAP00000071048	annotation not available (386 aa)
	LOC106570527	TLR4 interactor with leucine rich repeats-like. (840 aa)
	LOC106587532	Proteasome subunit alpha type. (338 aa)
	ENSSSAP00000084846	annotation not available (396 aa)
	LOC106569904	Proteasome subunit beta; Belongs to the peptidase T1B family. (257 aa)
	LOC106585461	P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel. Belongs to the P2X receptor family. (610 aa)
	zranb2	Zinc finger Ran-binding domain-containing protein 2; May interfere with constitutive 5'-splice site selection. Belongs to the ZRANB2 family. (333 aa)
	LOC106579964	P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel. Belongs to the P2X receptor family. (569 aa)
	LOC100534606	SCARB1-like protein 2 isoform X4; Belongs to the CD36 family. (518 aa)
	bpifb2	BPI fold-containing family B member 2. (473 aa)
	LOC106566628	Ninjurin-1-like isoform X1. (171 aa)
	LOC106561958	Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family. (622 aa)
	LOC106569537	Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3. (622 aa)
	LOC106565723	Bactericidal permeability-increasing protein-like. (475 aa)
	LOC106599990	Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3. (622 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSSAP00000017996	ENSSSAP00000084846	ENSSSAP00000017996	ENSSSAP00000084846	Platelet-activating factor receptor-like.	annotation not available	0.466
ENSSSAP00000017996	LOC106562016	ENSSSAP00000017996	ENSSSAP00000018008	Platelet-activating factor receptor-like.	Platelet-activating factor receptor-like; Belongs to the G-protein coupled receptor 1 family.	0.900
ENSSSAP00000017996	LOC106610672	ENSSSAP00000017996	ENSSSAP00000004758	Platelet-activating factor receptor-like.	Platelet-activating factor receptor-like; Belongs to the G-protein coupled receptor 1 family.	0.901
ENSSSAP00000084846	ENSSSAP00000017996	ENSSSAP00000084846	ENSSSAP00000017996	annotation not available	Platelet-activating factor receptor-like.	0.466
ENSSSAP00000084846	LOC100534606	ENSSSAP00000084846	ENSSSAP00000108350	annotation not available	SCARB1-like protein 2 isoform X4; Belongs to the CD36 family.	0.791
ENSSSAP00000084846	LOC106562016	ENSSSAP00000084846	ENSSSAP00000018008	annotation not available	Platelet-activating factor receptor-like; Belongs to the G-protein coupled receptor 1 family.	0.466
ENSSSAP00000084846	LOC106565723	ENSSSAP00000084846	ENSSSAP00000118950	annotation not available	Bactericidal permeability-increasing protein-like.	0.711
ENSSSAP00000084846	LOC106579964	ENSSSAP00000084846	ENSSSAP00000106160	annotation not available	P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel. Belongs to the P2X receptor family.	0.532
ENSSSAP00000084846	LOC106585461	ENSSSAP00000084846	ENSSSAP00000087242	annotation not available	P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel. Belongs to the P2X receptor family.	0.532
ENSSSAP00000084846	LOC106610672	ENSSSAP00000084846	ENSSSAP00000004758	annotation not available	Platelet-activating factor receptor-like; Belongs to the G-protein coupled receptor 1 family.	0.466
ENSSSAP00000084846	bpifb2	ENSSSAP00000084846	ENSSSAP00000108455	annotation not available	BPI fold-containing family B member 2.	0.711
ENSSSAP00000084846	sr-bi	ENSSSAP00000084846	ENSSSAP00000010200	annotation not available	Scavenger receptor class B type I isoform X1; Belongs to the CD36 family.	0.791
LOC100534606	ENSSSAP00000084846	ENSSSAP00000108350	ENSSSAP00000084846	SCARB1-like protein 2 isoform X4; Belongs to the CD36 family.	annotation not available	0.791
LOC100534606	sr-bi	ENSSSAP00000108350	ENSSSAP00000010200	SCARB1-like protein 2 isoform X4; Belongs to the CD36 family.	Scavenger receptor class B type I isoform X1; Belongs to the CD36 family.	0.901
LOC106561070	LOC106569904	ENSSSAP00000066407	ENSSSAP00000086715	Proteasome subunit alpha type-1.	Proteasome subunit beta; Belongs to the peptidase T1B family.	0.996
LOC106561070	LOC106588338	ENSSSAP00000066407	ENSSSAP00000032004	Proteasome subunit alpha type-1.	Proteasome subunit beta; Belongs to the peptidase T1B family.	0.996
LOC106561958	LOC106587117	ENSSSAP00000115025	ENSSSAP00000034781	Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.	Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.	0.900
LOC106562016	ENSSSAP00000017996	ENSSSAP00000018008	ENSSSAP00000017996	Platelet-activating factor receptor-like; Belongs to the G-protein coupled receptor 1 family.	Platelet-activating factor receptor-like.	0.900
LOC106562016	ENSSSAP00000084846	ENSSSAP00000018008	ENSSSAP00000084846	Platelet-activating factor receptor-like; Belongs to the G-protein coupled receptor 1 family.	annotation not available	0.466
LOC106562016	LOC106610672	ENSSSAP00000018008	ENSSSAP00000004758	Platelet-activating factor receptor-like; Belongs to the G-protein coupled receptor 1 family.	Platelet-activating factor receptor-like; Belongs to the G-protein coupled receptor 1 family.	0.901