112 items (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106592756	Nucleoredoxin-like protein 1. (226 aa)
	reco	Recoverin. (203 aa)
	ENSSSAP00000003984	annotation not available (498 aa)
	LOC106611926	Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma. (87 aa)
	LOC106610691	Interphotoreceptor matrix proteoglycan 1-like. (807 aa)
	LOC106611394	Retinitis pigmentosa 1-like 1 protein. (2835 aa)
	bbs7	Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function. (716 aa)
	rrh	Visual pigment-like receptor peropsin; Belongs to the G-protein coupled receptor 1 family. (334 aa)
	NXNL1	Nucleoredoxin-like protein 1. (206 aa)
	LOC106609395	Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 2-like isoform X1. (2123 aa)
	LOC106578369	RPE-retinal G protein-coupled receptor-like. (295 aa)
	RHO	Rhodopsin. (354 aa)
	LOC106576353	Guanylyl cyclase-activating protein 1-like. (189 aa)
	LOC106576364	Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 2-like. (1086 aa)
	LOC106605819	Recoverin-like. (193 aa)
	LOC106576429	Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 2-like. (155 aa)
	ccdc66	Coiled-coil domain-containing protein 66 isoform X1. (947 aa)
	ENSSSAP00000016850	annotation not available (225 aa)
	LOC106605317	Opsin-3-like. (395 aa)
	LOC106611158	Spermatogenesis-associated protein 7 homolog. (518 aa)
	LOC106611009	Photoreceptor outer segment membrane glycoprotein 2-like isoform X1. (364 aa)
	ENSSSAP00000018884	annotation not available (271 aa)
	LOC106610600	Uncharacterized protein C2orf71-like. (1148 aa)
	LOC106591794	Visual pigment-like receptor peropsin. (306 aa)
	LOC100136941	Short wave-sensitive opsin 2. (354 aa)
	LOC100136940	Long wave-sensitive opsin isoform X1. (403 aa)
	GNAT2	Guanine nucleotide-binding protein G(T) subunit alpha-2-like isoform X1. (354 aa)
	LOC106565104	Interphotoreceptor matrix proteoglycan 1-like isoform X1. (1362 aa)
	LOC106605756	Peripherin-2-like. (344 aa)
	LOC106613073	Guanylate cyclase. (1110 aa)
	LOC106596041	Oxygen-regulated protein 1-like. (288 aa)
	LOC106566369	Guanine nucleotide-binding protein G(T) subunit alpha-2-like. (352 aa)
	LOC106572426	Guanylyl cyclase-activating protein 2-like. (205 aa)
	LOC106560723	Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 2-like isoform X2. (218 aa)
	ENSSSAP00000033250	annotation not available (128 aa)
	ENSSSAP00000033717	Si:ch211-103a14.5. (201 aa)
	ENSSSAP00000033766	Guanylate cyclase 2D, retinal. (1123 aa)
	lyar	Cell growth-regulating nucleolar protein. (355 aa)
	LOC106602844	Guanylyl cyclase-activating protein 1-like. (210 aa)
	LOC106576743	Peripherin-2-like. (344 aa)
	ENSSSAP00000038686	annotation not available (299 aa)
	LOC106565989	Guanine nucleotide-binding protein G(T) subunit alpha-1. (350 aa)
	LOC106590998	Red-sensitive opsin-like. (358 aa)
	LOC106562400	Regulator of G-protein signaling 9-binding protein-like. (259 aa)
	LOC106563675	Guanylate cyclase. (1128 aa)
	LOC106591047	Kinesin-associated protein 3-like. (496 aa)
	LOC106571151	Photoreceptor outer segment membrane glycoprotein 2-like. (356 aa)
	ENSSSAP00000047459	RPE-retinal G protein-coupled receptor-like. (275 aa)
	LOC106571012	Titin-like. (2729 aa)
	Crb1	Crumbs 1, cell polarity complex component. (677 aa)
	kifap3	Kinesin-associated protein 3 isoform X1. (804 aa)
	LOC106603596	Guanylate cyclase. (1131 aa)
	CRB1	Protein crumbs homolog 1-like. (1323 aa)
	LOC106608337	Retinitis pigmentosa 1-like 1 protein. (3698 aa)
	LOC106576799	Opsin-3-like. (386 aa)
	ENSSSAP00000056455	annotation not available (204 aa)
	LOC106588288	Visinin-like. (193 aa)
	LOC106592174	IQ calmodulin-binding motif-containing protein 1-like. (292 aa)
	LOC106574645	X-linked retinitis pigmentosa GTPase regulator-like isoform X2. (1209 aa)
	ENSSSAP00000058558	annotation not available (113 aa)
	ENSSSAP00000058739	Bardet-Biedl syndrome 4 protein-like. (136 aa)
	LOC106561447	Cyclic nucleotide-gated cation channel beta-1-like isoform X2. (767 aa)
	LOC106583538	Rhodopsin. (347 aa)
	LOC106607576	Protein RD3-like. (216 aa)
	ENSSSAP00000061267	Opsin 1 (cone pigments), short-wave-sensitive 1. (304 aa)
	LOC106588120	Regulator of G-protein signaling 9-binding protein-like. (245 aa)
	ift140	Intraflagellar transport protein 140 homolog isoform X2. (1460 aa)
	LOC106593987	Protein C21orf2. (262 aa)
	LOC106596574	Red-sensitive opsin-like. (330 aa)
	LOC106560769	Bardet-Biedl syndrome 4 protein-like isoform X1. (526 aa)
	bsg	Basigin isoform X1. (389 aa)
	LOC106609403	Guanylyl cyclase-activating protein 1-like. (189 aa)
	ENSSSAP00000074158	Ceramide kinase-like. (534 aa)
	CNGB1	Cyclic nucleotide-gated cation channel beta-1-like isoform X6. (1765 aa)
	LOC106578913	Peripherin-2-like. (344 aa)
	LOC106581277	Guanylate cyclase. (1109 aa)
	ENSSSAP00000075486	Basigin. (272 aa)
	LOC106573206	Cyclic nucleotide-gated cation channel beta-1-like isoform X1. (1237 aa)
	LOC106567350	Guanylyl cyclase-activating protein 2-like. (212 aa)
	rpgr	X-linked retinitis pigmentosa GTPase regulator. (2066 aa)
	LOC106573044	Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 2-like isoform X3. (1406 aa)
	ENSSSAP00000078514	Recoverin 3. (153 aa)
	BBS4	Bardet-Biedl syndrome 4 protein-like. (523 aa)
	cnrg	annotation not available (87 aa)
	LOC106568738	Protein crumbs homolog 1-like. (986 aa)
	LOC106564799	Peroxisome assembly factor 2-like. (1096 aa)
	opn1sw	Short wavelength-sensitive 1 opsin. (334 aa)
	GNAT2-2	Guanine nucleotide-binding protein G(T) subunit alpha-2-like isoform X1. (352 aa)
	LOC106570879	Protein crumbs homolog 2-like. (1493 aa)
	LOC106597829	Retinitis pigmentosa 1-like 1 protein. (2937 aa)
	pcare	Uncharacterized protein C2orf71 homolog. (1162 aa)
	LOC106571273	Interphotoreceptor matrix proteoglycan 1-like isoform X3. (1094 aa)
	LOC106585440	Protein crumbs homolog 2-like. (1482 aa)
	ENSSSAP00000098088	annotation not available (442 aa)
	CNGB3	Cyclic nucleotide-gated cation channel beta-3-like. (623 aa)
	CNGB3-2	Cyclic nucleotide-gated cation channel beta-3-like. (628 aa)
	LOC106571197	Protein RD3-like. (220 aa)
	LOC106579995	Protein crumbs homolog 1-like. (1494 aa)
	LOC106578857	Recoverin-like. (203 aa)
	LOC106571640	Uncharacterized protein C2orf71 homolog. (871 aa)
	ENSSSAP00000106289	Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2. (333 aa)
	ENSSSAP00000107558	Crumbs cell polarity complex component 1. (1336 aa)
	ENSSSAP00000110237	Rhodopsin, like. (316 aa)
	LOC100136370	Rhodopsin. (354 aa)
	impg1	Interphotoreceptor matrix proteoglycan 1 isoform X1. (1884 aa)
	LOC106584006	Kinesin-associated protein 3-like isoform X2. (799 aa)
	LOC106582268	Ceramide kinase-like protein. (480 aa)
	ENSSSAP00000113943	annotation not available (443 aa)
	LOC106589440	Peripherin-2-like. (344 aa)
	LOC106590390	Regulator of G-protein signaling 9-binding protein B-like. (258 aa)
	kif17	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (826 aa)
	LOC106582877	Red-sensitive opsin-like. (357 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BBS4	bbs7	ENSSSAP00000079394	ENSSSAP00000008280	Bardet-Biedl syndrome 4 protein-like.	Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.	0.979
BBS4	ift140	ENSSSAP00000079394	ENSSSAP00000065831	Bardet-Biedl syndrome 4 protein-like.	Intraflagellar transport protein 140 homolog isoform X2.	0.597
CNGB1	ENSSSAP00000016850	ENSSSAP00000074878	ENSSSAP00000016850	Cyclic nucleotide-gated cation channel beta-1-like isoform X6.	annotation not available	0.465
CNGB1	ENSSSAP00000033250	ENSSSAP00000074878	ENSSSAP00000033250	Cyclic nucleotide-gated cation channel beta-1-like isoform X6.	annotation not available	0.445
CNGB1	ENSSSAP00000033717	ENSSSAP00000074878	ENSSSAP00000033717	Cyclic nucleotide-gated cation channel beta-1-like isoform X6.	Si:ch211-103a14.5.	0.532
CNGB1	ENSSSAP00000078514	ENSSSAP00000074878	ENSSSAP00000078514	Cyclic nucleotide-gated cation channel beta-1-like isoform X6.	Recoverin 3.	0.465
CNGB1	ENSSSAP00000106289	ENSSSAP00000074878	ENSSSAP00000106289	Cyclic nucleotide-gated cation channel beta-1-like isoform X6.	Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.	0.570
CNGB1	ENSSSAP00000110237	ENSSSAP00000074878	ENSSSAP00000110237	Cyclic nucleotide-gated cation channel beta-1-like isoform X6.	Rhodopsin, like.	0.467
CNGB1	GNAT2	ENSSSAP00000074878	ENSSSAP00000023669	Cyclic nucleotide-gated cation channel beta-1-like isoform X6.	Guanine nucleotide-binding protein G(T) subunit alpha-2-like isoform X1.	0.570
CNGB1	GNAT2-2	ENSSSAP00000074878	ENSSSAP00000089860	Cyclic nucleotide-gated cation channel beta-1-like isoform X6.	Guanine nucleotide-binding protein G(T) subunit alpha-2-like isoform X1.	0.570
CNGB1	LOC100136370	ENSSSAP00000074878	ENSSSAP00000111426	Cyclic nucleotide-gated cation channel beta-1-like isoform X6.	Rhodopsin.	0.467
CNGB1	LOC106565989	ENSSSAP00000074878	ENSSSAP00000038961	Cyclic nucleotide-gated cation channel beta-1-like isoform X6.	Guanine nucleotide-binding protein G(T) subunit alpha-1.	0.570
CNGB1	LOC106566369	ENSSSAP00000074878	ENSSSAP00000032080	Cyclic nucleotide-gated cation channel beta-1-like isoform X6.	Guanine nucleotide-binding protein G(T) subunit alpha-2-like.	0.570
CNGB1	LOC106567350	ENSSSAP00000074878	ENSSSAP00000076297	Cyclic nucleotide-gated cation channel beta-1-like isoform X6.	Guanylyl cyclase-activating protein 2-like.	0.544
CNGB1	LOC106572426	ENSSSAP00000074878	ENSSSAP00000032372	Cyclic nucleotide-gated cation channel beta-1-like isoform X6.	Guanylyl cyclase-activating protein 2-like.	0.544
CNGB1	LOC106576353	ENSSSAP00000074878	ENSSSAP00000013697	Cyclic nucleotide-gated cation channel beta-1-like isoform X6.	Guanylyl cyclase-activating protein 1-like.	0.532
CNGB1	LOC106578857	ENSSSAP00000074878	ENSSSAP00000104814	Cyclic nucleotide-gated cation channel beta-1-like isoform X6.	Recoverin-like.	0.477
CNGB1	LOC106583538	ENSSSAP00000074878	ENSSSAP00000059830	Cyclic nucleotide-gated cation channel beta-1-like isoform X6.	Rhodopsin.	0.467
CNGB1	LOC106588288	ENSSSAP00000074878	ENSSSAP00000056763	Cyclic nucleotide-gated cation channel beta-1-like isoform X6.	Visinin-like.	0.465
CNGB1	LOC106602844	ENSSSAP00000074878	ENSSSAP00000035580	Cyclic nucleotide-gated cation channel beta-1-like isoform X6.	Guanylyl cyclase-activating protein 1-like.	0.652