14 items (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106613045	Forkhead box protein G1-like. (426 aa)
	foxg1	Forkhead box protein G1. (412 aa)
	LOC106610161	Vascular endothelial growth factor C-like isoform X1; Belongs to the PDGF/VEGF growth factor family. (407 aa)
	LOC106611199	Forkhead box protein G1-like. (411 aa)
	LOC106608074	Forkhead box protein G1-like. (311 aa)
	LOC106577111	Forkhead box protein G1-like. (308 aa)
	vegfc	Vascular endothelial growth factor C precursor; Belongs to the PDGF/VEGF growth factor family. (409 aa)
	LOC106609760	Smoothened homolog. (529 aa)
	LOC106566398	Zinc finger protein 335-like isoform X1. (1742 aa)
	ENSSSAP00000111499	annotation not available (326 aa)
	LOC106562352	Lysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. (866 aa)
	LOC106609776	Smoothened homolog; Belongs to the G-protein coupled receptor Fz/Smo family. (832 aa)
	LOC106610674	Lysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. (828 aa)
	ENSSSAP00000088306	Zinc finger protein 335-like. (955 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC106611199	LOC106613045	ENSSSAP00000068896	ENSSSAP00000078106	Forkhead box protein G1-like.	Forkhead box protein G1-like.	0.904
LOC106611199	foxg1	ENSSSAP00000068896	ENSSSAP00000077518	Forkhead box protein G1-like.	Forkhead box protein G1.	0.900
LOC106613045	LOC106611199	ENSSSAP00000078106	ENSSSAP00000068896	Forkhead box protein G1-like.	Forkhead box protein G1-like.	0.904
LOC106613045	foxg1	ENSSSAP00000078106	ENSSSAP00000077518	Forkhead box protein G1-like.	Forkhead box protein G1.	0.905
foxg1	LOC106611199	ENSSSAP00000077518	ENSSSAP00000068896	Forkhead box protein G1.	Forkhead box protein G1-like.	0.900
foxg1	LOC106613045	ENSSSAP00000077518	ENSSSAP00000078106	Forkhead box protein G1.	Forkhead box protein G1-like.	0.905