15 items (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106599374	E3 ubiquitin-protein ligase RNF220-like isoform X1. (712 aa)
	LOC106610223	Endothelin B receptor-like; Belongs to the G-protein coupled receptor 1 family. (481 aa)
	LOC106613460	E3 ubiquitin-protein ligase RNF220-like. (248 aa)
	LOC106610171	Scrapie-responsive protein 1-like. (215 aa)
	LOC106589028	Uncharacterized protein LOC106589028. (275 aa)
	ENSSSAP00000057936	annotation not available (290 aa)
	ENSSSAP00000057840	Ring finger protein 220a. (413 aa)
	LOC106602386	Heart- and neural crest derivatives-expressed protein 2-like. (211 aa)
	ENSSSAP00000045575	annotation not available (283 aa)
	LOC106578207	Endothelin-1 receptor-like. (222 aa)
	rnf220	E3 ubiquitin-protein ligase RNF220. (319 aa)
	LOC106581341	Paired mesoderm homeobox protein 2A-like. (298 aa)
	LOC106611542	Paired mesoderm homeobox protein 2B-like. (289 aa)
	LOC106570392	Endothelin-1-like. (203 aa)
	LOC106604546	Paired mesoderm homeobox protein 2B-like. (286 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSSAP00000045575	LOC106602386	ENSSSAP00000045575	ENSSSAP00000057484	annotation not available	Heart- and neural crest derivatives-expressed protein 2-like.	0.464
ENSSSAP00000045575	LOC106610171	ENSSSAP00000045575	ENSSSAP00000086427	annotation not available	Scrapie-responsive protein 1-like.	0.464
LOC106570392	LOC106578207	ENSSSAP00000019078	ENSSSAP00000041268	Endothelin-1-like.	Endothelin-1 receptor-like.	0.985
LOC106570392	LOC106589028	ENSSSAP00000019078	ENSSSAP00000076828	Endothelin-1-like.	Uncharacterized protein LOC106589028.	0.900
LOC106570392	LOC106602386	ENSSSAP00000019078	ENSSSAP00000057484	Endothelin-1-like.	Heart- and neural crest derivatives-expressed protein 2-like.	0.510
LOC106570392	LOC106610171	ENSSSAP00000019078	ENSSSAP00000086427	Endothelin-1-like.	Scrapie-responsive protein 1-like.	0.510
LOC106570392	LOC106610223	ENSSSAP00000019078	ENSSSAP00000104145	Endothelin-1-like.	Endothelin B receptor-like; Belongs to the G-protein coupled receptor 1 family.	0.998
LOC106578207	LOC106570392	ENSSSAP00000041268	ENSSSAP00000019078	Endothelin-1 receptor-like.	Endothelin-1-like.	0.985
LOC106578207	LOC106589028	ENSSSAP00000041268	ENSSSAP00000076828	Endothelin-1 receptor-like.	Uncharacterized protein LOC106589028.	0.985
LOC106581341	LOC106602386	ENSSSAP00000037688	ENSSSAP00000057484	Paired mesoderm homeobox protein 2A-like.	Heart- and neural crest derivatives-expressed protein 2-like.	0.464
LOC106581341	LOC106610171	ENSSSAP00000037688	ENSSSAP00000086427	Paired mesoderm homeobox protein 2A-like.	Scrapie-responsive protein 1-like.	0.464
LOC106589028	LOC106570392	ENSSSAP00000076828	ENSSSAP00000019078	Uncharacterized protein LOC106589028.	Endothelin-1-like.	0.900
LOC106589028	LOC106578207	ENSSSAP00000076828	ENSSSAP00000041268	Uncharacterized protein LOC106589028.	Endothelin-1 receptor-like.	0.985
LOC106589028	LOC106602386	ENSSSAP00000076828	ENSSSAP00000057484	Uncharacterized protein LOC106589028.	Heart- and neural crest derivatives-expressed protein 2-like.	0.510
LOC106589028	LOC106610171	ENSSSAP00000076828	ENSSSAP00000086427	Uncharacterized protein LOC106589028.	Scrapie-responsive protein 1-like.	0.510
LOC106589028	LOC106610223	ENSSSAP00000076828	ENSSSAP00000104145	Uncharacterized protein LOC106589028.	Endothelin B receptor-like; Belongs to the G-protein coupled receptor 1 family.	0.998
LOC106602386	ENSSSAP00000045575	ENSSSAP00000057484	ENSSSAP00000045575	Heart- and neural crest derivatives-expressed protein 2-like.	annotation not available	0.464
LOC106602386	LOC106570392	ENSSSAP00000057484	ENSSSAP00000019078	Heart- and neural crest derivatives-expressed protein 2-like.	Endothelin-1-like.	0.510
LOC106602386	LOC106581341	ENSSSAP00000057484	ENSSSAP00000037688	Heart- and neural crest derivatives-expressed protein 2-like.	Paired mesoderm homeobox protein 2A-like.	0.464
LOC106602386	LOC106589028	ENSSSAP00000057484	ENSSSAP00000076828	Heart- and neural crest derivatives-expressed protein 2-like.	Uncharacterized protein LOC106589028.	0.510