STRINGSTRING
LOC106580473 LOC106580473 LOC106588764 LOC106588764 LOC106564589 LOC106564589 haus3 haus3 poln poln ENSSSAP00000025590 ENSSSAP00000025590 LOC106605322 LOC106605322 rev1 rev1 ENSSSAP00000112721 ENSSSAP00000112721 pola1 pola1 polh polh ENSSSAP00000104950 ENSSSAP00000104950 ENSSSAP00000102908 ENSSSAP00000102908 REV3L REV3L poli-2 poli-2 LOC106607739 LOC106607739 pole pole LOC106580482 LOC106580482 LOC106576788 LOC106576788 polg polg LOC106595036 LOC106595036 LOC106586740 LOC106586740 DPOD1 DPOD1 polb polb poli poli primpol primpol LOC106601920 LOC106601920 LOC106569276 LOC106569276 ENSSSAP00000027531 ENSSSAP00000027531
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC106580473DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity. (312 aa)
LOC106588764DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity. (542 aa)
LOC106564589DNA polymerase lambda-like; Belongs to the DNA polymerase type-X family. (565 aa)
haus3HAUS augmin-like complex subunit 3. (641 aa)
polnDNA polymerase nu. (1656 aa)
ENSSSAP00000025590annotation not available (47 aa)
LOC106605322DNA nucleotidylexotransferase; Template-independent DNA polymerase which catalyzes the random addition of deoxynucleoside 5'-triphosphate to the 3'-end of a DNA initiator. (510 aa)
rev1DNA repair protein REV1. (1451 aa)
ENSSSAP00000112721annotation not available (332 aa)
pola1DNA polymerase. (1466 aa)
polhDNA polymerase eta. (782 aa)
ENSSSAP00000104950Polymerase (DNA directed) kappa. (401 aa)
ENSSSAP00000102908annotation not available (83 aa)
REV3LDNA polymerase zeta catalytic subunit-like isoform X1. (3016 aa)
poli-2Salmo salar polymerase (DNA directed) iota (poli), mRNA. (761 aa)
LOC106607739DNA polymerase zeta catalytic subunit-like isoform X2. (3040 aa)
poleDNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2292 aa)
LOC106580482DNA polymerase kappa-like. (790 aa)
LOC106576788DNA nucleotidylexotransferase; Template-independent DNA polymerase which catalyzes the random addition of deoxynucleoside 5'-triphosphate to the 3'-end of a DNA initiator. (511 aa)
polgDNA polymerase subunit gamma-1. (1202 aa)
LOC106595036Helicase and polymerase-containing protein TEBICHI-like isoform X2. (137 aa)
LOC106586740DNA repair protein REV1-like. (1613 aa)
DPOD1DNA polymerase. (899 aa)
polbDNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity. (344 aa)
poliDNA polymerase iota-like isoform X1. (761 aa)
primpolDNA-directed primase/polymerase protein. (528 aa)
LOC106601920DNA polymerase delta catalytic subunit-like. (681 aa)
LOC106569276DNA-directed DNA/RNA polymerase mu; Gap-filling polymerase involved in repair of DNA double- strand breaks by non-homologous end joining (NHEJ). Belongs to the DNA polymerase type-X family. (554 aa)
ENSSSAP00000027531annotation not available (47 aa)
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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