STRINGSTRING
exd2 exd2 LOC106611270 LOC106611270 PLD4 PLD4 meiob meiob LOC106605280 LOC106605280 ENSSSAP00000012203 ENSSSAP00000012203 ercc5 ercc5 LOC106576591 LOC106576591 LOC106576591-2 LOC106576591-2 LOC106575916 LOC106575916 ENSSSAP00000017215 ENSSSAP00000017215 LOC106574192 LOC106574192 LOC106591776 LOC106591776 gen1 gen1 LOC106591874 LOC106591874 tatdn1 tatdn1 LOC106577450 LOC106577450 LOC106601920 LOC106601920 ENSSSAP00000035080 ENSSSAP00000035080 ercc4 ercc4 LOC106612700 LOC106612700 ENSSSAP00000038656 ENSSSAP00000038656 ENSSSAP00000042491 ENSSSAP00000042491 ENDOV ENDOV DPOD1 DPOD1 ENSSSAP00000047854 ENSSSAP00000047854 ENSSSAP00000048213 ENSSSAP00000048213 apex1 apex1 mus81 mus81 LOC106592153 LOC106592153 endog endog bivm bivm rad9a rad9a exo5 exo5 LOC106591530 LOC106591530 LOC106572090 LOC106572090 RAD1 RAD1 LOC106612271 LOC106612271 MRE11 MRE11 dclre1b dclre1b LOC106591197 LOC106591197 rad51c rad51c Mre11 Mre11 dffb dffb LOC106602420 LOC106602420 apex2 apex2 dnase1l3 dnase1l3 DNA2 DNA2 ENSSSAP00000080183 ENSSSAP00000080183 rexo2 rexo2 pole pole aplf aplf pld3 pld3 dclre1a dclre1a fan1 fan1 LOC106572890 LOC106572890 LOC106567314 LOC106567314 ENSSSAP00000093095 ENSSSAP00000093095 LOC106581956 LOC106581956 exog exog LOC106566885 LOC106566885 aptx aptx exo1 exo1 ENSSSAP00000105766 ENSSSAP00000105766 LOC106565748 LOC106565748 mgme1 mgme1 ENSSSAP00000111484 ENSSSAP00000111484 FEN1 FEN1 ENSSSAP00000112721 ENSSSAP00000112721 rad9b rad9b
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
exd2Exonuclease 3'-5' domain-containing protein 2. (421 aa)
LOC106611270Endoribonuclease Dicer-like; Belongs to the helicase family. Dicer subfamily. (2146 aa)
PLD4Phospholipase D4-like. (519 aa)
meiobMeiosis-specific with OB domain-containing protein isoform X1. (464 aa)
LOC106605280Deoxyribonuclease-2-alpha-like. (400 aa)
ENSSSAP00000012203annotation not available (115 aa)
ercc5DNA repair protein complementing XP-G cells. (775 aa)
LOC106576591DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. (342 aa)
LOC106576591-2DNA-(apurinic or apyrimidinic site) lyase-like. (342 aa)
LOC106575916DNA annealing helicase and endonuclease ZRANB3-like isoform X1. (523 aa)
ENSSSAP00000017215annotation not available (115 aa)
LOC106574192Serine-rich adhesin for platelets-like isoform X1. (1257 aa)
LOC106591776Endonuclease domain-containing 1 protein-like isoform X1. (325 aa)
gen1Flap endonuclease GEN homolog 1. (979 aa)
LOC106591874Exonuclease 3'-5' domain-containing protein 2-like. (550 aa)
tatdn1Putative deoxyribonuclease TATDN1 isoform X1. (324 aa)
LOC106577450Structure-specific endonuclease subunit SLX1; Catalytic subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. (246 aa)
LOC106601920DNA polymerase delta catalytic subunit-like. (681 aa)
ENSSSAP00000035080annotation not available (383 aa)
ercc4DNA repair endonuclease XPF. (911 aa)
LOC106612700Phospholipase D3-like. (504 aa)
ENSSSAP00000038656annotation not available (72 aa)
ENSSSAP00000042491annotation not available (750 aa)
ENDOVEndonuclease V-like isoform X1. (286 aa)
DPOD1DNA polymerase. (899 aa)
ENSSSAP00000047854annotation not available (265 aa)
ENSSSAP00000048213annotation not available (185 aa)
apex1Salmo salar APEX nuclease (multifunctional DNA repair enzyme) 1 (apex1), mRNA. (344 aa)
mus81Crossover junction endonuclease MUS81. (575 aa)
LOC106592153Deoxyribonuclease-1-like. (212 aa)
endogEndonuclease. (309 aa)
bivmBasic immunoglobulin-like variable motif-containing protein isoform X1. (524 aa)
rad9aCell cycle checkpoint control protein; Belongs to the rad9 family. (393 aa)
exo5Exonuclease V. (322 aa)
LOC106591530Endonuclease domain-containing 1 protein-like. (305 aa)
LOC106572090Deoxyribonuclease gamma-like. (323 aa)
RAD1Cell cycle checkpoint protein RAD1. (279 aa)
LOC106612271Uncharacterized protein LOC106612271 isoform X1. (868 aa)
MRE11Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (474 aa)
dclre1b5' exonuclease Apollo isoform X1. (704 aa)
LOC106591197Deoxyribonuclease-1-like. (186 aa)
rad51cDNA repair protein RAD51 homolog 3. (400 aa)
Mre11MRE11 homolog, double strand break repair nuclease. (452 aa)
dffbDNAation factor subunit beta isoform X2. (331 aa)
LOC106602420Endoribonuclease Dicer-like isoform X1; Belongs to the helicase family. Dicer subfamily. (1995 aa)
apex2DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. (601 aa)
dnase1l3Deoxyribonuclease; Belongs to the DNase I family. (298 aa)
DNA2DNA replication ATP-dependent helicase/nuclease DNA2. (1073 aa)
ENSSSAP00000080183annotation not available (109 aa)
rexo2Oligoribonuclease, mitochondrial. (289 aa)
poleDNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2292 aa)
aplfAprataxin and PNK-like factor isoform X1. (356 aa)
pld3Phospholipase D family member 3. (495 aa)
dclre1aDNA cross-link repair 1A protein. (898 aa)
fan1Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. (1075 aa)
LOC106572890Deoxyribonuclease; Belongs to the DNase I family. (316 aa)
LOC106567314DNA-(Apurinic or apyrimidinic site) lyase 2-like. (299 aa)
ENSSSAP00000093095annotation not available (250 aa)
LOC106581956Deoxyribonuclease-2-alpha-like isoform X1. (391 aa)
exogNuclease EXOG, mitochondrial. (367 aa)
LOC106566885DNAation factor subunit beta-like. (422 aa)
aptxAprataxin. (348 aa)
exo1Exonuclease 1. (786 aa)
ENSSSAP00000105766annotation not available (252 aa)
LOC106565748Histone-lysine N-methyltransferase SETMAR-like. (304 aa)
mgme1Mitochondrial genome maintenance exonuclease 1; Metal-dependent single-stranded DNA (ssDNA) exonuclease involved in mitochondrial genome maintenance. Has preference for 5'-3' exonuclease activity. Necessary for maintenance of proper 7S DNA levels. Probably involved in mitochondrial DNA (mtDNA) repair. Belongs to the MGME1 family. (353 aa)
ENSSSAP00000111484SET domain and mariner transposase fusion gene. (283 aa)
FEN1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (402 aa)
ENSSSAP00000112721annotation not available (332 aa)
rad9bCell cycle checkpoint control protein RAD9B. (301 aa)
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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