9 items (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106603304	ectodysplasin-A-like isoform X3; Belongs to the tumor necrosis factor family. (364 aa)
	LOC106561969	FAS-associated death domain protein-like. (195 aa)
	LOC106587129	FAS-associated death domain protein-like. (221 aa)
	LOC106606565	ectodysplasin-A receptor-associated adapter protein-like. (222 aa)
	LOC106576942	ectodysplasin-A receptor-associated adapter protein-like isoform X1. (222 aa)
	LOC106573030	Protein fem-1 homolog B-like. (624 aa)
	LOC106567777	ectodysplasin-A-like isoform X1; Belongs to the tumor necrosis factor family. (365 aa)
	ntf3	Neurotrophin-3; Seems to promote the survival of visceral and proprioceptive sensory neurons; Belongs to the NGF-beta family. (259 aa)
	fem1b	Protein fem-1 homolog B. (641 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC106561969	LOC106587129	ENSSSAP00000115282	ENSSSAP00000037844	FAS-associated death domain protein-like.	FAS-associated death domain protein-like.	0.900
LOC106567777	LOC106576942	ENSSSAP00000085799	ENSSSAP00000105172	ectodysplasin-A-like isoform X1; Belongs to the tumor necrosis factor family.	ectodysplasin-A receptor-associated adapter protein-like isoform X1.	0.764
LOC106567777	LOC106603304	ENSSSAP00000085799	ENSSSAP00000084943	ectodysplasin-A-like isoform X1; Belongs to the tumor necrosis factor family.	ectodysplasin-A-like isoform X3; Belongs to the tumor necrosis factor family.	0.900
LOC106567777	LOC106606565	ENSSSAP00000085799	ENSSSAP00000004286	ectodysplasin-A-like isoform X1; Belongs to the tumor necrosis factor family.	ectodysplasin-A receptor-associated adapter protein-like.	0.764
LOC106576942	LOC106567777	ENSSSAP00000105172	ENSSSAP00000085799	ectodysplasin-A receptor-associated adapter protein-like isoform X1.	ectodysplasin-A-like isoform X1; Belongs to the tumor necrosis factor family.	0.764
LOC106576942	LOC106603304	ENSSSAP00000105172	ENSSSAP00000084943	ectodysplasin-A receptor-associated adapter protein-like isoform X1.	ectodysplasin-A-like isoform X3; Belongs to the tumor necrosis factor family.	0.764
LOC106587129	LOC106561969	ENSSSAP00000037844	ENSSSAP00000115282	FAS-associated death domain protein-like.	FAS-associated death domain protein-like.	0.900
LOC106603304	LOC106567777	ENSSSAP00000084943	ENSSSAP00000085799	ectodysplasin-A-like isoform X3; Belongs to the tumor necrosis factor family.	ectodysplasin-A-like isoform X1; Belongs to the tumor necrosis factor family.	0.900
LOC106603304	LOC106576942	ENSSSAP00000084943	ENSSSAP00000105172	ectodysplasin-A-like isoform X3; Belongs to the tumor necrosis factor family.	ectodysplasin-A receptor-associated adapter protein-like isoform X1.	0.764
LOC106603304	LOC106606565	ENSSSAP00000084943	ENSSSAP00000004286	ectodysplasin-A-like isoform X3; Belongs to the tumor necrosis factor family.	ectodysplasin-A receptor-associated adapter protein-like.	0.764
LOC106606565	LOC106567777	ENSSSAP00000004286	ENSSSAP00000085799	ectodysplasin-A receptor-associated adapter protein-like.	ectodysplasin-A-like isoform X1; Belongs to the tumor necrosis factor family.	0.764
LOC106606565	LOC106603304	ENSSSAP00000004286	ENSSSAP00000084943	ectodysplasin-A receptor-associated adapter protein-like.	ectodysplasin-A-like isoform X3; Belongs to the tumor necrosis factor family.	0.764