STRINGSTRING
gtf2h5 gtf2h5 Ercc3 Ercc3 ENSSSAP00000000686 ENSSSAP00000000686 ercc3 ercc3 gtf2h3 gtf2h3 ENSSSAP00000095840 ENSSSAP00000095840 LOC106584761 LOC106584761 ENSSSAP00000074515 ENSSSAP00000074515 ercc2 ercc2 gtf2h4 gtf2h4 gtf2h1 gtf2h1 mnat1 mnat1 LOC100196672 LOC100196672 ccnh ccnh
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
gtf2h5General transcription factor IIH subunit 5. (71 aa)
Ercc3ERCC excision repair 3, TFIIH core complex helicase subunit. (100 aa)
ENSSSAP00000000686MNAT1 component of CDK activating kinase. (303 aa)
ercc3TFIIH basal transcription factor complex helicase XPB subunit. (759 aa)
gtf2h3General transcription factor IIH subunit 3. (303 aa)
ENSSSAP00000095840Cyclin H. (183 aa)
LOC106584761General transcription factor IIH subunit 1-like. (599 aa)
ENSSSAP00000074515Excision repair cross-complementation group 2. (324 aa)
ercc2TFIIH basal transcription factor complex helicase subunit. (849 aa)
gtf2h4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (462 aa)
gtf2h1General transcription factor IIH subunit 1. (588 aa)
mnat1CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (314 aa)
LOC100196672General transcription factor IIH subunit. (393 aa)
ccnhcyclin-H isoform X1; Belongs to the cyclin family. (324 aa)
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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