25 items (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106599499	Ribose-5-phosphate isomerase-like. (293 aa)
	taldo	Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. (338 aa)
	ENSSSAP00000101386	annotation not available (252 aa)
	ENSSSAP00000087422	Transaldolase 1. (324 aa)
	g6pd	Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis. (572 aa)
	LOC106571947	Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis. (563 aa)
	LOC106582765	GDH/6PGL endoplasmic bifunctional protein-like. (795 aa)
	ENSSSAP00000075662	annotation not available (290 aa)
	LOC106583364	Transketolase-like. (604 aa)
	shpk	Sedoheptulokinase isoform X1. (497 aa)
	LOC106595626	Ribose-5-phosphate isomerase-like. (143 aa)
	rpe	Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. (228 aa)
	LOC100380727	Transketolase-like protein 2. (642 aa)
	pgls	6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate. (257 aa)
	LOC106565155	Transketolase-like. (633 aa)
	LOC106582040	Ribulose-phosphate 3-epimerase-like. (190 aa)
	LOC106611449	Ribose-5-phosphate isomerase-like. (315 aa)
	tkt	Transketolase-like protein 2. (658 aa)
	LOC106565995	GDH/6PGL endoplasmic bifunctional protein-like. (794 aa)
	TKT-2	Transketolase-like. (642 aa)
	ENSSSAP00000028592	annotation not available (182 aa)
	LOC106572705	Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis. (539 aa)
	rbks	Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. (339 aa)
	TKT	Transketolase-like. (643 aa)
	ENSSSAP00000009032	Sedoheptulokinase. (348 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSSAP00000009032	LOC106565995	ENSSSAP00000009032	ENSSSAP00000035754	Sedoheptulokinase.	GDH/6PGL endoplasmic bifunctional protein-like.	0.462
ENSSSAP00000009032	LOC106582765	ENSSSAP00000009032	ENSSSAP00000085505	Sedoheptulokinase.	GDH/6PGL endoplasmic bifunctional protein-like.	0.462
ENSSSAP00000028592	LOC106565995	ENSSSAP00000028592	ENSSSAP00000035754	annotation not available	GDH/6PGL endoplasmic bifunctional protein-like.	0.462
ENSSSAP00000028592	LOC106582765	ENSSSAP00000028592	ENSSSAP00000085505	annotation not available	GDH/6PGL endoplasmic bifunctional protein-like.	0.462
ENSSSAP00000075662	ENSSSAP00000101386	ENSSSAP00000075662	ENSSSAP00000101386	annotation not available	annotation not available	0.619
ENSSSAP00000075662	LOC100380727	ENSSSAP00000075662	ENSSSAP00000049314	annotation not available	Transketolase-like protein 2.	0.932
ENSSSAP00000075662	LOC106565155	ENSSSAP00000075662	ENSSSAP00000045232	annotation not available	Transketolase-like.	0.932
ENSSSAP00000075662	LOC106565995	ENSSSAP00000075662	ENSSSAP00000035754	annotation not available	GDH/6PGL endoplasmic bifunctional protein-like.	0.934
ENSSSAP00000075662	LOC106571947	ENSSSAP00000075662	ENSSSAP00000085547	annotation not available	Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis.	0.750
ENSSSAP00000075662	LOC106572705	ENSSSAP00000075662	ENSSSAP00000023678	annotation not available	Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis.	0.750
ENSSSAP00000075662	LOC106582040	ENSSSAP00000075662	ENSSSAP00000041022	annotation not available	Ribulose-phosphate 3-epimerase-like.	0.903
ENSSSAP00000075662	LOC106582765	ENSSSAP00000075662	ENSSSAP00000085505	annotation not available	GDH/6PGL endoplasmic bifunctional protein-like.	0.934
ENSSSAP00000075662	LOC106583364	ENSSSAP00000075662	ENSSSAP00000071496	annotation not available	Transketolase-like.	0.932
ENSSSAP00000075662	LOC106595626	ENSSSAP00000075662	ENSSSAP00000059705	annotation not available	Ribose-5-phosphate isomerase-like.	0.847
ENSSSAP00000075662	LOC106599499	ENSSSAP00000075662	ENSSSAP00000000029	annotation not available	Ribose-5-phosphate isomerase-like.	0.847
ENSSSAP00000075662	LOC106611449	ENSSSAP00000075662	ENSSSAP00000040279	annotation not available	Ribose-5-phosphate isomerase-like.	0.847
ENSSSAP00000075662	TKT	ENSSSAP00000075662	ENSSSAP00000011170	annotation not available	Transketolase-like.	0.932
ENSSSAP00000075662	TKT-2	ENSSSAP00000075662	ENSSSAP00000035435	annotation not available	Transketolase-like.	0.932
ENSSSAP00000075662	g6pd	ENSSSAP00000075662	ENSSSAP00000086018	annotation not available	Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis.	0.750
ENSSSAP00000075662	pgls	ENSSSAP00000075662	ENSSSAP00000046369	annotation not available	6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.	0.745