STRINGSTRING
rpb4 rpb4 if4a3 if4a3 smg1 smg1 LOC106602922 LOC106602922 ctif ctif LOC106605192 LOC106605192 LOC100194717 LOC100194717 exos4 exos4 LOC106609593 LOC106609593 upf3b upf3b LOC106610663 LOC106610663 smg9 smg9 LOC106593600 LOC106593600 LOC106607498 LOC106607498 LOC106599087 LOC106599087 LOC106575761 LOC106575761 ENSSSAP00000008190 ENSSSAP00000008190 LOC106597766 LOC106597766 DXO DXO LOC106565269 LOC106565269 cnot3 cnot3 LOC106593654 LOC106593654 ENSSSAP00000010089 ENSSSAP00000010089 dis3l2 dis3l2 ENSSSAP00000010521 ENSSSAP00000010521 LOC106611868 LOC106611868 tisb tisb LOC106612723 LOC106612723 LOC106603492 LOC106603492 LOC106603437 LOC106603437 LOC106612716 LOC106612716 LOC106560998 LOC106560998 LOC106603260 LOC106603260 LOC106608164 LOC106608164 tgfi1 tgfi1 pelo pelo LOC106563799 LOC106563799 LOC106605282 LOC106605282 tbp tbp rbm8a rbm8a ENSSSAP00000014892 ENSSSAP00000014892 LOC106569064 LOC106569064 nbp1a nbp1a LOC106600823 LOC106600823 exosc8 exosc8 LOC106573951 LOC106573951 LOC106560907 LOC106560907 pan3 pan3 zc3h12a zc3h12a EXOS9 EXOS9 LOC106584057 LOC106584057 LOC106597592 LOC106597592 ENSSSAP00000020118 ENSSSAP00000020118 LOC106584061 LOC106584061 LOC106593654-2 LOC106593654-2 LOC106610612 LOC106610612 ENSSSAP00000021979 ENSSSAP00000021979 ENSSSAP00000022531 ENSSSAP00000022531 LOC106597766-2 LOC106597766-2 ENSSSAP00000022583 ENSSSAP00000022583 LOC106596192 LOC106596192 ENSSSAP00000022746 ENSSSAP00000022746 ENSSSAP00000023187 ENSSSAP00000023187 ENSSSAP00000024189 ENSSSAP00000024189 LOC106596388 LOC106596388 pnrc2 pnrc2 PNPT1 PNPT1 LOC106568378 LOC106568378 pde12 pde12 LOC106593654-3 LOC106593654-3 snd1 snd1 LOC106595781 LOC106595781 ENSSSAP00000028908 ENSSSAP00000028908 LOC106568923 LOC106568923 lsm7 lsm7 LOC106590917 LOC106590917 ENSSSAP00000033895 ENSSSAP00000033895 LOC106593654-4 LOC106593654-4 ENSSSAP00000034844 ENSSSAP00000034844 ENSSSAP00000034985 ENSSSAP00000034985 LOC106571976 LOC106571976 LOC106605140 LOC106605140 ncbp2 ncbp2 LOC106606733 LOC106606733 LOC106609972 LOC106609972 LOC106613585 LOC106613585 pan2 pan2 pym1b pym1b pym1a pym1a exosc3 exosc3 cnot9 cnot9 LOC106566956 LOC106566956 LOC100380868 LOC100380868 lsm7-2 lsm7-2 LOC106580729 LOC106580729 LOC106560426 LOC106560426 atm atm LOC106583205 LOC106583205 LOC106588910 LOC106588910 lsm2 lsm2 LOC106560432 LOC106560432 LOC106581644 LOC106581644 NCBP1 NCBP1 ENSSSAP00000049389 ENSSSAP00000049389 CNOT3 CNOT3 LOC106613627 LOC106613627 LOC106613629 LOC106613629 LOC106561687 LOC106561687 LSM1 LSM1 ENSSSAP00000050742 ENSSSAP00000050742 LOC106561715 LOC106561715 LOC106597194 LOC106597194 LOC106595781-2 LOC106595781-2 LOC106604834 LOC106604834 exosc6 exosc6 swt1 swt1 LOC106605151 LOC106605151 LOC106561350 LOC106561350 ENSSSAP00000055038 ENSSSAP00000055038 ENSSSAP00000055072 ENSSSAP00000055072 exos2 exos2 LOC106588450 LOC106588450 lab lab LOC106609128 LOC106609128 LOC106575212 LOC106575212 exosc9 exosc9 LOC106582250 LOC106582250 LOC106604162 LOC106604162 ZHX2 ZHX2 LOC106570475 LOC106570475 exosc5 exosc5 ENSSSAP00000064394 ENSSSAP00000064394 cnot8 cnot8 LOC106589826 LOC106589826 LOC106612273 LOC106612273 ENSSSAP00000066332 ENSSSAP00000066332 ENSSSAP00000067326 ENSSSAP00000067326 LOC106594919 LOC106594919 LOC106590454 LOC106590454 ENSSSAP00000069793 ENSSSAP00000069793 LOC106585979 LOC106585979 LOC106611287 LOC106611287 LOC106599575 LOC106599575 dcps dcps LOC106612443 LOC106612443 LOC106602767 LOC106602767 LOC106604687 LOC106604687 LOC106565911 LOC106565911 LOC106586023 LOC106586023 LOC106581162 LOC106581162 cnot6 cnot6 LOC106589020 LOC106589020 mettl3 mettl3 LOC106585172 LOC106585172 cnot2 cnot2 LOC106560824 LOC106560824 edc4 edc4 ENSSSAP00000080004 ENSSSAP00000080004 ENSSSAP00000080632 ENSSSAP00000080632 LOC106613034 LOC106613034 dcp2 dcp2 LOC106567695 LOC106567695 ENSSSAP00000087416 ENSSSAP00000087416 EDC3 EDC3 LOC106571262 LOC106571262 LOC106611818 LOC106611818 ENSSSAP00000088686 ENSSSAP00000088686 LOC106605117 LOC106605117 hrsp12 hrsp12 LOC106569767 LOC106569767 LOC106585873 LOC106585873 MRT4 MRT4 LOC106587552 LOC106587552 LOC106603994 LOC106603994 LOC106589653 LOC106589653 LOC106564785 LOC106564785 LOC106573909 LOC106573909 LOC106573910 LOC106573910 LOC106581844 LOC106581844 LOC106581883 LOC106581883 helz2 helz2 LOC106582818 LOC106582818 LOC106583651 LOC106583651 i2c3 i2c3 LOC106570868 LOC106570868 LOC106568944 LOC106568944 LOC106570056 LOC106570056 LOC106588514 LOC106588514 PNPT1-2 PNPT1-2 ttc37 ttc37 LOC106610200 LOC106610200 LOC106580576 LOC106580576 zfp36l1 zfp36l1 LOC106602955 LOC106602955 LOC106611515 LOC106611515 mettl16 mettl16 LOC106612892 LOC106612892 LOC106610231 LOC106610231 LOC100380636 LOC100380636 ENSSSAP00000105257 ENSSSAP00000105257 LOC106568870 LOC106568870 LOC106611791 LOC106611791 LOC106574282 LOC106574282 LOC106602708 LOC106602708 LOC106568098 LOC106568098 LOC106599024 LOC106599024 exosc7 exosc7 LOC106580723 LOC106580723 LOC106580722 LOC106580722 smg7 smg7 exosc10 exosc10 LOC106586484 LOC106586484 LOC106578552 LOC106578552 mlh1 mlh1 LOC106586213 LOC106586213
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rpb4DNA-directed RNA polymerase II subunit RPB4. (143 aa)
if4a3Eukaryotic initiation factor 4A-III; ATP-dependent RNA helicase. Involved in pre-mRNA splicing as component of the spliceosome. Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. The EJC is a dynamic structure consisting of core proteins and several peripheral nuclear and cytoplasmic associated factors that join the complex only transiently either during EJC assembly or during subsequent mRNA metabolism. The EJC marks the position of the exon-exon junction in the mature mRNA for the gene expression machinery and the [...] (460 aa)
smg1Serine/threonine-protein kinase SMG1; Belongs to the PI3/PI4-kinase family. (3214 aa)
LOC106602922CCR4-NOT transcription complex subunit 6-like. (560 aa)
ctifCBP80/20-dependent translation initiation factor isoform X2. (680 aa)
LOC106605192Zinc finger protein 36, C3H1 type-like 2-A. (429 aa)
LOC100194717Eukaryotic peptide chain release factor subunit 1. (461 aa)
exos4Exosome complex exonuclease RRP41. (245 aa)
LOC106609593Staphylococcal nuclease domain-containing protein 1-like. (178 aa)
upf3bRegulator of nonsense transcripts 3B. (479 aa)
LOC106610663YTH domain-containing family protein 2-like. (625 aa)
smg9Protein SMG9; Involved in nonsense-mediated decay (NMD) of mRNAs containing premature stop codons. Is recruited by release factors to stalled ribosomes together with smg1 and smg8 (forming the SMG1C protein kinase complex) and, in the SMG1C complex, is required for the efficient association between smg1 and smg8 (By similarity); Belongs to the SMG9 family. (546 aa)
LOC106593600poly(A)-specific ribonuclease PARN-like. (753 aa)
LOC106607498Protein CASC3-like. (776 aa)
LOC106599087Roquin-1-like isoform X1. (1425 aa)
LOC106575761CCR4-NOT transcription complex subunit 10-like isoform X6. (734 aa)
ENSSSAP00000008190Nocturnin b. (388 aa)
LOC106597766Nocturnin-like. (405 aa)
DXODecapping and exoribonuclease protein-like. (439 aa)
LOC106565269Helicase with zinc finger domain 2-like. (2846 aa)
cnot3LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 3. (955 aa)
LOC106593654Zinc fingers and homeoboxes protein 2-like. (827 aa)
ENSSSAP00000010089annotation not available (75 aa)
dis3l2DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of both mRNAs and miRNAs that have been polyuridylated by a terminal uridylyltransferase. Essential for correct mitosis, and negatively regulates cell proliferation. Belongs to the RNR ribonuclease family. DIS3L2 subfamily. (1049 aa)
ENSSSAP00000010521annotation not available (551 aa)
LOC106611868CCR4-NOT transcription complex subunit 6-like isoform X1. (583 aa)
tisbButyrate response factor 1. (364 aa)
LOC106612723Zinc finger protein 36, C3H1 type-like 1 isoform X2. (400 aa)
LOC106603492CCR4-NOT transcription complex subunit 7 isoform X2. (300 aa)
LOC106603437Protein SMG8-like. (926 aa)
LOC106612716Zinc finger protein 36, C3H1 type-like 2. (400 aa)
LOC106560998CCR4-NOT transcription complex subunit 2-like isoform X3. (551 aa)
LOC106603260Eukaryotic peptide chain release factor subunit 1. (446 aa)
LOC106608164Zinc finger protein 36, C3H1 type-like 1 isoform X1. (346 aa)
tgfi1Protein PAT1 homolog 2 isoform X1. (595 aa)
peloProtein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. (385 aa)
LOC106563799Telomerase-binding protein EST1A-like isoform X1. (1891 aa)
LOC106605282Protein SMG5-like. (1106 aa)
tbpTATA-box-binding protein isoform X1. (299 aa)
rbm8aRNA-binding protein 8A; Required for pre-mRNA splicing as component of the spliceosome (By similarity). Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. The EJC is a dynamic structure consisting of core proteins and several peripheral nuclear and cytoplasmic associated factors that join the complex only transiently either during EJC assembly or during subsequent mRNA metabolism. The EJC marks the position of the exon-exon junction in the mature mRNA for the gene expression machinery and the core components remain [...] (196 aa)
ENSSSAP00000014892annotation not available (99 aa)
LOC106569064Protein SMG7-like isoform X2. (1188 aa)
nbp1aNuclear cap-binding protein subunit 1; Component of the cap-binding complex (CBC), which binds cotranscriptionally to the 5'-cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense-mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5'-end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U sn [...] (796 aa)
LOC106600823Protein CASC3-like. (772 aa)
exosc8Exosome complex component RRP43. (704 aa)
LOC106573951Roquin-1-like isoform X1. (960 aa)
LOC106560907YTH domain-containing family protein 2-like. (625 aa)
pan3PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA deca [...] (831 aa)
zc3h12aRibonuclease ZC3H12A. (615 aa)
EXOS9Exosome complex component RRP45-like. (94 aa)
LOC106584057Protein mago nashi homolog; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. The EJC is a dynamic structure consisting of core proteins and several peripheral nuclear and cytoplasmic associated factors that join the complex only transiently either during EJC assembly or during subsequent mRNA metabolism. The EJC marks the position of the exon-exon junction in the mature mRNA for the gene expression machinery and the core components remain bound to spliced mRNAs throughout all stages of mRNA metabolism thereby infl [...] (147 aa)
LOC106597592CCR4-NOT transcription complex subunit 2-like. (339 aa)
ENSSSAP00000020118annotation not available (95 aa)
LOC106584061Terminal uridylyltransferase 4-like isoform X2. (1565 aa)
LOC106593654-2Zinc fingers and homeoboxes protein 2-like. (827 aa)
LOC106610612Protein Smaug homolog 1-like isoform X1. (776 aa)
ENSSSAP00000021979annotation not available (154 aa)
ENSSSAP00000022531annotation not available (79 aa)
LOC106597766-2Nocturnin-like. (405 aa)
ENSSSAP00000022583annotation not available (94 aa)
LOC106596192rutC family protein in vnfA 5'region-like. (130 aa)
ENSSSAP00000022746annotation not available (94 aa)
ENSSSAP00000023187annotation not available (401 aa)
ENSSSAP00000024189annotation not available (811 aa)
LOC106596388Nocturnin-like. (405 aa)
pnrc2Proline-rich nuclear receptor coactivator 2; Involved in nonsense-mediated mRNA decay (NMD) by acting as a bridge between the mRNA decapping complex and the NMD machinery. May act by targeting the NMD machinery to the P-body and recruiting the decapping machinery to aberrant mRNAs. Required for upf1/rent1 localization to the P-body. Also acts as a nuclear receptor coactivator (By similarity); Belongs to the PNRC family. PNRC2 subfamily. (156 aa)
PNPT1Polyribonucleotide nucleotidyltransferase 1, mitochondrial-like. (779 aa)
LOC106568378Roquin-2-like isoform X1. (1235 aa)
pde122',5'-phosphodiesterase 12. (586 aa)
LOC106593654-3Zinc fingers and homeoboxes protein 2-like. (827 aa)
snd1Staphylococcal nuclease domain-containing protein; Endonuclease that mediates miRNA decay of both protein-free and AGO2-loaded miRNAs. (712 aa)
LOC106595781mRNA-decapping enzyme 1B-like. (120 aa)
ENSSSAP00000028908annotation not available (102 aa)
LOC106568923Roquin-1-like isoform X2. (1085 aa)
lsm7LSM7 homolog, U6 small nuclear RNA associated. (111 aa)
LOC106590917Terminal uridylyltransferase 7-like. (217 aa)
ENSSSAP00000033895annotation not available (670 aa)
LOC106593654-4Zinc fingers and homeoboxes protein 2-like. (827 aa)
ENSSSAP00000034844annotation not available (94 aa)
ENSSSAP00000034985annotation not available (100 aa)
LOC106571976mRNA-decapping enzyme 1A-like isoform X1. (523 aa)
LOC106605140Proline-rich nuclear receptor coactivator 2-like. (156 aa)
ncbp2Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (155 aa)
LOC106606733Decapping and exoribonuclease protein-like. (439 aa)
LOC106609972Protein PAT1 homolog 1-like isoform X1. (812 aa)
LOC106613585Roquin-1-like isoform X1. (1057 aa)
pan2PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent [...] (1197 aa)
pym1bPartner of Y14 and mago B; Key regulator of the exon junction complex (EJC), a multiprotein complex that associates immediately upstream of the exon- exon junction on mRNAs and serves as a positional landmark for the intron exon structure of genes and directs post-transcriptional processes in the cytoplasm such as mRNA export, nonsense-mediated mRNA decay (NMD) or translation. Acts as an EJC disassembly factor, allowing translation-dependent EJC removal and recycling by disrupting mature EJC from spliced mRNAs. Its association with the 40S ribosomal subunit probably prevents a translat [...] (288 aa)
pym1aPartner of Y14 and mago A; Key regulator of the exon junction complex (EJC), a multiprotein complex that associates immediately upstream of the exon- exon junction on mRNAs and serves as a positional landmark for the intron exon structure of genes and directs post-transcriptional processes in the cytoplasm such as mRNA export, nonsense-mediated mRNA decay (NMD) or translation. Acts as an EJC disassembly factor, allowing translation-dependent EJC removal and recycling by disrupting mature EJC from spliced mRNAs. Its association with the 40S ribosomal subunit probably prevents a translat [...] (202 aa)
exosc3Exosome complex component RRP40. (244 aa)
cnot9Cell differentiation protein RCD1 homolog isoform X1. (326 aa)
LOC106566956Exosome complex component RRP4-like. (247 aa)
LOC100380868Terminal uridylyltransferase 7. (897 aa)
lsm7-2U6 snRNA-associated Sm-like protein LSm7. (107 aa)
LOC106580729Zinc finger protein 36, C3H1 type-like 1. (400 aa)
LOC106560426Terminal uridylyltransferase 4-like isoform X2. (1559 aa)
atmNon-specific serine/threonine protein kinase. (3172 aa)
LOC106583205Ribonuclease ZC3H12A-like. (671 aa)
LOC106588910Nanos homolog 2-like; Belongs to the nanos family. (182 aa)
lsm2U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
LOC106560432Protein mago nashi homolog. (147 aa)
LOC106581644Regulator of nonsense transcripts 3A-like isoform X3. (485 aa)
NCBP1Nuclear cap-binding protein subunit 1-like isoform X1. (796 aa)
ENSSSAP00000049389Argonaute RISC catalytic component 2. (871 aa)
CNOT3CCR4-NOT transcription complex subunit 3. (689 aa)
LOC106613627Regulator of nonsense transcripts 1-like isoform X1. (1107 aa)
LOC106613629U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (147 aa)
LOC106561687Roquin-2-like isoform X1. (1099 aa)
LSM1U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. (171 aa)
ENSSSAP00000050742annotation not available (60 aa)
LOC106561715Enhancer of mRNA-decapping protein 3-like. (487 aa)
LOC106597194mRNA-decapping enzyme 1B-like. (478 aa)
LOC106595781-2mRNA-decapping enzyme 1B-like. (120 aa)
LOC106604834CCR4-NOT transcription complex subunit 6-like. (568 aa)
exosc6Exosome complex exonuclease MTR3. (277 aa)
swt1Transcriptional protein SWT1 isoform X1. (1070 aa)
LOC106605151Protein argonaute-3-like. (922 aa)
LOC106561350CCR4-NOT transcription complex subunit 1-like isoform X11. (2376 aa)
ENSSSAP00000055038annotation not available (867 aa)
ENSSSAP00000055072CBP80/20-dependent translation initiation factor-like. (63 aa)
exos2Exosome complex exonuclease RRP4. (296 aa)
LOC106588450CCR4-NOT transcription complex subunit 3-like isoform X3. (1007 aa)
labLupus La protein homolog B. (401 aa)
LOC106609128Regulator of nonsense transcripts 2-like isoform X3. (1355 aa)
LOC106575212Cell differentiation protein RCD1 homolog isoform X1. (301 aa)
exosc9Exosome complex component RRP45. (524 aa)
LOC106582250CCR4-NOT transcription complex subunit 11 isoform X1. (449 aa)
LOC106604162DNA-directed RNA polymerase II subunit RPB7-like. (178 aa)
ZHX2Zinc fingers and homeoboxes protein 2-like. (827 aa)
LOC106570475Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include ago2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] (893 aa)
exosc5Exosome complex component RRP46 isoform X1. (228 aa)
ENSSSAP00000064394annotation not available (110 aa)
cnot8CCR4-NOT transcription complex subunit 8. (285 aa)
LOC106589826ATP-dependent RNA helicase SUPV3L1, mitochondrial-like isoform X1. (778 aa)
LOC106612273DNA-directed RNA polymerase II subunit RPB7. (172 aa)
ENSSSAP00000066332annotation not available (79 aa)
ENSSSAP00000067326annotation not available (94 aa)
LOC106594919Serine/threonine-protein kinase SMG1-like. (490 aa)
LOC106590454PAB-dependent poly(A)-specific ribonuclease subunit PAN3-like isoform X1. (582 aa)
ENSSSAP00000069793annotation not available (79 aa)
LOC106585979LOW QUALITY PROTEIN: terminal uridylyltransferase 7-like. (1079 aa)
LOC106611287Zinc finger protein 36, C3H1 type-like 1. (395 aa)
LOC1065995755'-3' exoribonuclease 1. (1698 aa)
dcpsm7GpppX diphosphatase. (330 aa)
LOC106612443ATP-dependent RNA helicase SUPV3L1, mitochondrial-like isoform X1. (782 aa)
LOC106602767Protein PAT1 homolog 1-like. (808 aa)
LOC106604687Nocturnin-like isoform X1. (474 aa)
LOC106565911Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (241 aa)
LOC106586023Regulator of nonsense transcripts 3A-like isoform X4. (461 aa)
LOC106581162Protein Smaug homolog 2-like isoform X1. (676 aa)
cnot6CCR4-NOT transcription complex, subunit 6 isoform X2. (557 aa)
LOC106589020Ribonuclease ZC3H12A-like. (700 aa)
mettl3N6-adenosine-methyltransferase 70 kDa subunit; Belongs to the MT-A70-like family. (590 aa)
LOC106585172U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. (133 aa)
cnot2CCR4-NOT transcription complex subunit 2 isoform X1. (552 aa)
LOC106560824Enhancer of mRNA-decapping protein 4-like isoform X4. (1392 aa)
edc4Enhancer of mRNA-decapping protein 4 isoform X1. (1429 aa)
ENSSSAP00000080004CCR4-NOT transcription complex, subunit 1. (2324 aa)
ENSSSAP00000080632CCR4-NOT transcription complex, subunit 3b. (936 aa)
LOC106613034Protein Smaug homolog 2-like isoform X2. (672 aa)
dcp2m7GpppN-mRNA hydrolase isoform X1. (402 aa)
LOC106567695Protein SMG8-like. (967 aa)
ENSSSAP00000087416Methyltransferase like 16. (435 aa)
EDC3Enhancer of mRNA-decapping protein 3-like. (475 aa)
LOC1065712625'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. (959 aa)
LOC106611818Eukaryotic peptide chain release factor subunit 1-like. (482 aa)
ENSSSAP00000088686annotation not available (1277 aa)
LOC106605117Ribonuclease ZC3H12A-like. (662 aa)
hrsp12Ribonuclease UK114. (373 aa)
LOC106569767Protein argonaute-3; Required for RNA-mediated gene silencing (RNAi). Binds to short RNAs such as microRNAs (miRNAs) and represses the translation of mRNAs which are complementary to them. Lacks endonuclease activity and does not appear to cleave target mRNAs; Belongs to the argonaute family. Ago subfamily. (878 aa)
LOC106585873CCR4-NOT transcription complex subunit 6-like isoform X1. (600 aa)
MRT4Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (313 aa)
LOC106587552Enhancer of mRNA-decapping protein 3-like. (477 aa)
LOC106603994Telomerase-binding protein EST1A-like. (1368 aa)
LOC106589653TATA-box-binding protein-like. (299 aa)
LOC106564785Eukaryotic initiation factor 4A-III. (430 aa)
LOC106573909U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (150 aa)
LOC106573910Regulator of nonsense transcripts 1-like isoform X2. (1107 aa)
LOC106581844RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (175 aa)
LOC106581883Protein SMG5-like. (1110 aa)
helz2Helicase with zinc finger domain 2 isoform X1. (2725 aa)
LOC106582818Protein argonaute-1 isoform X7; Belongs to the argonaute family. (903 aa)
LOC106583651Helicase with zinc finger domain 2-like. (2816 aa)
i2c3Eukaryotic translation initiation factor 2C 3. (889 aa)
LOC106570868CCR4-NOT transcription complex subunit 6-like isoform X1. (570 aa)
LOC106568944Regulator of nonsense transcripts 1 isoform X4. (1112 aa)
LOC106570056Helicase SKI2W-like isoform X1. (1284 aa)
LOC106588514Helicase SKI2W-like. (1260 aa)
PNPT1-2Polyribonucleotide nucleotidyltransferase 1, mitochondrial isoform X1. (777 aa)
ttc37Tetratricopeptide repeat protein 37. (1524 aa)
LOC106610200U6 snRNA-associated Sm-like protein LSm6. (134 aa)
LOC106580576U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. (133 aa)
zfp36l1Zinc finger protein 36, C3H1 type-like 1. (421 aa)
LOC106602955Protein Smaug homolog 1-like isoform X1. (769 aa)
LOC106611515Regulator of nonsense transcripts 3B-like. (456 aa)
mettl16U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase; RNA N6-methyltransferase that methylates adenosine residues of a subset of RNAs and plays a key role in S-adenosyl-L-methionine homeostasis by regulating expression of MAT2A transcripts. Able to N6- methylate a subset of mRNAs and U6 small nuclear RNAs (U6 snRNAs). In contrast to the METTL3-METTL14 heterodimer, only able to methylate a limited number of RNAs: requires both a 5'UACAGAGAA-3' nonamer sequence and a specific RNA structure. In presence of S-adenosyl-L-methionine, binds the 3'-UTR region of MAT2A mRNA and specifical [...] (594 aa)
LOC106612892DNA-directed RNA polymerase II subunit RPB4. (142 aa)
LOC106610231U6 snRNA-associated Sm-like protein LSm6. (80 aa)
LOC1003806365'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. (953 aa)
ENSSSAP00000105257Serine-protein kinase ATM-like. (111 aa)
LOC1065688705'-3' exoribonuclease 1. (1695 aa)
LOC106611791Zinc finger CCHC domain-containing protein 7-like. (497 aa)
LOC106574282Cell differentiation protein RCD1 homolog isoform X2. (297 aa)
LOC106602708Zinc finger protein 36, C3H1 type-like 1. (385 aa)
LOC106568098Eukaryotic peptide chain release factor subunit 1-like. (446 aa)
LOC106599024Regulator of nonsense transcripts 1-like isoform X3. (1101 aa)
exosc7Exosome complex exonuclease RRP42. (316 aa)
LOC106580723Tristetraprolin-like. (364 aa)
LOC106580722Zinc finger protein 36, C3H1 type-like 1. (393 aa)
smg7Protein SMG7 isoform X1. (1185 aa)
exosc10Exosome component 10. (1008 aa)
LOC106586484CCR4-NOT transcription complex subunit 11-like isoform X1. (482 aa)
LOC106578552poly(A) RNA polymerase, mitochondrial-like. (582 aa)
mlh1DNA mismatch repair protein Mlh1. (729 aa)
LOC106586213Lupus La protein homolog B-like. (400 aa)
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (20%) [HD]