32 items (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106577532	Splicing factor 1-like. (684 aa)
	LOC106586722	Nuclear receptor subfamily 0 group B member 1-like. (295 aa)
	ENSSSAP00000041104	annotation not available (186 aa)
	msc	Musculin. (173 aa)
	t184a	Salmo salar Transmembrane protein 184A (t184a), mRNA. (426 aa)
	wt1-2	Wilms tumor protein isoform X1. (478 aa)
	LOC106587831	Wilms tumor protein homolog isoform X2. (462 aa)
	TMEM184B	Transmembrane protein 184B-like isoform X1. (448 aa)
	LOC106607146	Transmembrane protein 184B-like isoform X1. (426 aa)
	LOC106567785	Androgen receptor beta 1. (855 aa)
	LOC106608594	Splicing factor 1-like. (680 aa)
	LOC106609488	Transmembrane protein 184B-like. (434 aa)
	wt1	Wilms tumor protein isoform X1. (486 aa)
	NR0B1	Nuclear receptor subfamily 0 group B member 1-like. (304 aa)
	LOC106592366	Steroid 17-alpha-hydroxylase/17,20 lyase-like; Belongs to the cytochrome P450 family. (192 aa)
	LOC106589543	Transmembrane protein 184B-like isoform X1. (434 aa)
	ENSSSAP00000026407	annotation not available (166 aa)
	LOC106604267	Androgen receptor-like. (696 aa)
	LOC106576693	Steroid 17-alpha-hydroxylase/17,20 lyase; Belongs to the cytochrome P450 family. (514 aa)
	ar	Androgen receptor isoform X1. (853 aa)
	gthb2	Gonadotropin subunit beta-2 isoform X1. (142 aa)
	LOC106589750	Mitogen-activated protein kinase kinase kinase 4-like isoform X1. (1725 aa)
	mettl3	N6-adenosine-methyltransferase 70 kDa subunit; Belongs to the MT-A70-like family. (590 aa)
	LOC106607336	Transmembrane protein 184B-like. (422 aa)
	LOC106591667	Nuclear receptor subfamily 0 group B member 1-like. (264 aa)
	LOC106612183	Uncharacterized protein LOC106612183 isoform X1. (449 aa)
	ENSSSAP00000062239	annotation not available (1132 aa)
	ENSSSAP00000061817	Mitogen-activated protein kinase kinase kinase 4-like. (543 aa)
	ENSSSAP00000057130	Musculin (activated B-cell factor-1). (179 aa)
	tcf21	Transcription factor 21. (177 aa)
	TCF21	Transcription factor 21. (214 aa)
	LOC106575623	Nuclear receptor subfamily 0 group B member 1-like. (264 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSSAP00000026407	TCF21	ENSSSAP00000026407	ENSSSAP00000048672	annotation not available	Transcription factor 21.	0.462
ENSSSAP00000026407	tcf21	ENSSSAP00000026407	ENSSSAP00000055350	annotation not available	Transcription factor 21.	0.462
LOC106567785	LOC106586722	ENSSSAP00000084777	ENSSSAP00000048379	Androgen receptor beta 1.	Nuclear receptor subfamily 0 group B member 1-like.	0.489
LOC106567785	LOC106604267	ENSSSAP00000084777	ENSSSAP00000085235	Androgen receptor beta 1.	Androgen receptor-like.	0.903
LOC106567785	NR0B1	ENSSSAP00000084777	ENSSSAP00000014989	Androgen receptor beta 1.	Nuclear receptor subfamily 0 group B member 1-like.	0.502
LOC106567785	ar	ENSSSAP00000084777	ENSSSAP00000089683	Androgen receptor beta 1.	Androgen receptor isoform X1.	0.903
LOC106576693	LOC106592366	ENSSSAP00000087766	ENSSSAP00000020379	Steroid 17-alpha-hydroxylase/17,20 lyase; Belongs to the cytochrome P450 family.	Steroid 17-alpha-hydroxylase/17,20 lyase-like; Belongs to the cytochrome P450 family.	0.900
LOC106586722	LOC106567785	ENSSSAP00000048379	ENSSSAP00000084777	Nuclear receptor subfamily 0 group B member 1-like.	Androgen receptor beta 1.	0.489
LOC106586722	LOC106604267	ENSSSAP00000048379	ENSSSAP00000085235	Nuclear receptor subfamily 0 group B member 1-like.	Androgen receptor-like.	0.489
LOC106586722	ar	ENSSSAP00000048379	ENSSSAP00000089683	Nuclear receptor subfamily 0 group B member 1-like.	Androgen receptor isoform X1.	0.428
LOC106586722	wt1	ENSSSAP00000048379	ENSSSAP00000010076	Nuclear receptor subfamily 0 group B member 1-like.	Wilms tumor protein isoform X1.	0.741
LOC106586722	wt1-2	ENSSSAP00000048379	ENSSSAP00000030672	Nuclear receptor subfamily 0 group B member 1-like.	Wilms tumor protein isoform X1.	0.739
LOC106587831	TCF21	ENSSSAP00000028403	ENSSSAP00000048672	Wilms tumor protein homolog isoform X2.	Transcription factor 21.	0.462
LOC106587831	tcf21	ENSSSAP00000028403	ENSSSAP00000055350	Wilms tumor protein homolog isoform X2.	Transcription factor 21.	0.462
LOC106592366	LOC106576693	ENSSSAP00000020379	ENSSSAP00000087766	Steroid 17-alpha-hydroxylase/17,20 lyase-like; Belongs to the cytochrome P450 family.	Steroid 17-alpha-hydroxylase/17,20 lyase; Belongs to the cytochrome P450 family.	0.900
LOC106604267	LOC106567785	ENSSSAP00000085235	ENSSSAP00000084777	Androgen receptor-like.	Androgen receptor beta 1.	0.903
LOC106604267	LOC106586722	ENSSSAP00000085235	ENSSSAP00000048379	Androgen receptor-like.	Nuclear receptor subfamily 0 group B member 1-like.	0.489
LOC106604267	NR0B1	ENSSSAP00000085235	ENSSSAP00000014989	Androgen receptor-like.	Nuclear receptor subfamily 0 group B member 1-like.	0.502
LOC106604267	ar	ENSSSAP00000085235	ENSSSAP00000089683	Androgen receptor-like.	Androgen receptor isoform X1.	0.903
NR0B1	LOC106567785	ENSSSAP00000014989	ENSSSAP00000084777	Nuclear receptor subfamily 0 group B member 1-like.	Androgen receptor beta 1.	0.502