120 items (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106567585	Olfactory marker protein-like. (175 aa)
	LOC106604005	Olfactory receptor 2A12-like. (342 aa)
	LOC106604013	Olfactory receptor 1361-like. (329 aa)
	ENSSSAP00000001428	Olfactory receptor 145-like. (185 aa)
	LOC106604014	Olfactory receptor. (333 aa)
	LOC106603715	Olfactory marker protein-like. (163 aa)
	LOC106611037	Tetratricopeptide repeat protein 8-like isoform X1. (515 aa)
	ENSSSAP00000004815	annotation not available (336 aa)
	LOC106591546	Tetratricopeptide repeat protein 8-like isoform X1. (515 aa)
	LOC106609920	P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel. (404 aa)
	LOC106564634	Calcium homeostasis modulator protein 1-like. (356 aa)
	LOC106566693	Guanine nucleotide-binding protein G(S) subunit alpha-like. (394 aa)
	casr	Extracellular calcium-sensing receptor isoform X1. (941 aa)
	LOC106563807	Olfactory receptor. (329 aa)
	LOC106574173	Receptor-transporting protein 2-like. (167 aa)
	rtp3	Receptor-transporting protein 3. (165 aa)
	ENSSSAP00000014958	annotation not available (325 aa)
	LOC106607897	Adenylate cyclase; Catalyzes the formation of the signaling molecule cAMP in response to G-protein signaling. (1182 aa)
	LOC106593775	Olfactory receptor 1361-like. (298 aa)
	ENSSSAP00000019705	annotation not available (306 aa)
	LOC106603243	Olfactory receptor. (301 aa)
	LOC106563658	Olfactory receptor 1M1-like. (341 aa)
	LOC106588722	Receptor-transporting protein 3-like. (176 aa)
	LOC106592055	Olfactory receptor. (314 aa)
	ENSSSAP00000021610	annotation not available (318 aa)
	ENSSSAP00000021908	annotation not available (318 aa)
	ENSSSAP00000022291	annotation not available (318 aa)
	GNAT2	Guanine nucleotide-binding protein G(T) subunit alpha-2-like isoform X1. (354 aa)
	ENSSSAP00000024780	Olfactory receptor 1361-like. (272 aa)
	ENSSSAP00000025615	Guanine nucleotide-binding protein G(s) subunit alpha-like. (129 aa)
	mkks	McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin. (583 aa)
	LOC106612753	Olfactory receptor 6N2-like. (326 aa)
	LOC106568045	Main olfactory receptor family F subfamily 115 member 5. (315 aa)
	LOC106565690	Tachykinin-like peptides receptor 86C. (361 aa)
	LOC100136488	Main olfactory receptor family F subfamily 115 member 6. (310 aa)
	gpr157	Carbonic anhydrase 6-like. (538 aa)
	LOC106566369	Guanine nucleotide-binding protein G(T) subunit alpha-2-like. (352 aa)
	trpa1	Transient receptor potential cation channel subfamily A member 1; Belongs to the transient receptor (TC 1.A.4) family. (1006 aa)
	LOC106565989	Guanine nucleotide-binding protein G(T) subunit alpha-1. (350 aa)
	LOC106561867	Nucleoredoxin-like protein 2. (157 aa)
	ENSSSAP00000043226	annotation not available (293 aa)
	LOC106599327	Transient receptor potential cation channel subfamily A member 1-like isoform X1; Belongs to the transient receptor (TC 1.A.4) family. (1135 aa)
	ENSSSAP00000043366	annotation not available (319 aa)
	LOC106613198	Putative gustatory receptor clone PTE01. (314 aa)
	LOC106613197	Olfactory receptor 52J3-like. (314 aa)
	LOC106613178	Olfactory receptor. (315 aa)
	LOC106613177	Olfactory receptor. (324 aa)
	LOC106613185	Olfactory receptor. (316 aa)
	lef1	Lymphoid enhancer-binding factor 1 isoform X5. (408 aa)
	LOC106568432	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. (67 aa)
	LOC106568042	Olfactory receptor. (331 aa)
	ENSSSAP00000051252	annotation not available (276 aa)
	ENSSSAP00000051673	G-protein coupled receptor family C group 6 member A-like. (786 aa)
	LOC106596458	Guanine nucleotide-binding protein G(Olf) subunit alpha-like. (136 aa)
	LOC106600258	G-protein coupled receptor family C group 6 member A-like. (856 aa)
	LOC106579594	G-protein coupled receptor family C group 6 member A-like. (892 aa)
	LOC106613329	Olfactory receptor. (334 aa)
	LOC106590663	Transient receptor potential cation channel subfamily A member 1-like; Belongs to the transient receptor (TC 1.A.4) family. (990 aa)
	LOC106603570	Main olfactory receptor family F subfamily 115 member 4. (312 aa)
	LOC106603568	Olfactory receptor 52N5-like. (312 aa)
	LOC106603566	Olfactory receptor 1052-like. (323 aa)
	ENSSSAP00000056455	annotation not available (204 aa)
	LOC106570620	Receptor-transporting protein 3-like. (220 aa)
	ENSSSAP00000058739	Bardet-Biedl syndrome 4 protein-like. (136 aa)
	LOC106590334	Guanine nucleotide-binding protein G(Olf) subunit alpha isoform X1. (480 aa)
	LOC106566382	Carbonic anhydrase 6-like; Belongs to the alpha-carbonic anhydrase family. (563 aa)
	LOC106581379	Olfactory receptor 10A6-like. (323 aa)
	LOC106593968	Guanine nucleotide-binding protein G(S) subunit alpha-like. (78 aa)
	LOC106595428	Olfactory receptor 1361-like. (332 aa)
	ENSSSAP00000066917	annotation not available (433 aa)
	LOC106593916	Trace amine-associated receptor 1-like; Belongs to the G-protein coupled receptor 1 family. (387 aa)
	ENSSSAP00000070975	annotation not available (239 aa)
	LOC106565880	Vomeronasal type-1 receptor. (318 aa)
	LOC106560769	Bardet-Biedl syndrome 4 protein-like isoform X1. (526 aa)
	ENSSSAP00000072725	annotation not available (432 aa)
	LOC106580269	P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel. (407 aa)
	LOC106605024	Adenylate cyclase type 3-like. (1191 aa)
	LOC106569648	Probable G-protein coupled receptor 148. (334 aa)
	ENSSSAP00000078912	annotation not available (322 aa)
	MOR121-2	Olfactory receptor 2A25-like. (305 aa)
	LOC106612769	Olfactory receptor. (310 aa)
	LOC106612773	Main olfactory receptor family E subfamily 121 member 1. (310 aa)
	LOC106612772	Olfactory receptor. (310 aa)
	LOC106612771	Olfactory receptor 11A1-like. (344 aa)
	LOC106612770	Olfactory receptor. (316 aa)
	ENSSSAP00000078974	annotation not available (331 aa)
	LOC106612925	Olfactory receptor. (339 aa)
	ENSSSAP00000078989	annotation not available (279 aa)
	ENSSSAP00000078995	annotation not available (300 aa)
	LOC106612764	Olfactory receptor. (339 aa)
	BBS4	Bardet-Biedl syndrome 4 protein-like. (523 aa)
	LOC106584132	Adenylate cyclase; Catalyzes the formation of the signaling molecule cAMP in response to G-protein signaling. (1186 aa)
	LOC106605539	G-protein coupled receptor family C group 6 member A-like. (928 aa)
	LOC106569231	Transient receptor potential cation channel subfamily A member 1-like; Belongs to the transient receptor (TC 1.A.4) family. (1105 aa)
	calhm3	Calcium homeostasis modulator protein 3. (331 aa)
	LOC106613276	Vomeronasal type-2 receptor 1-like. (958 aa)
	ENSSSAP00000087698	annotation not available (235 aa)
	ENSSSAP00000088281	Odorant receptor, family D, subfamily 111, member 6. (265 aa)
	GNAT2-2	Guanine nucleotide-binding protein G(T) subunit alpha-2-like isoform X1. (352 aa)
	LOC106607535	G-protein coupled receptor family C group 6 member A-like; Belongs to the G-protein coupled receptor 3 family. (856 aa)
	TAAR1	Trace amine-associated receptor 1-like; Belongs to the G-protein coupled receptor 1 family. (386 aa)
	TAAR1-2	Trace amine-associated receptor 1-like; Belongs to the G-protein coupled receptor 1 family. (343 aa)
	TAAR1-3	Trace amine-associated receptor 1-like; Belongs to the G-protein coupled receptor 1 family. (339 aa)
	ENSSSAP00000094160	annotation not available (294 aa)
	ENSSSAP00000094606	annotation not available (214 aa)
	LOC106581088	Olfactory receptor 50-like. (334 aa)
	ENSSSAP00000098275	annotation not available (176 aa)
	TAAR5	Trace amine-associated receptor 13c-like. (342 aa)
	TAAR5-2	Trace amine associated receptor 5. (326 aa)
	TAAR5-3	Trace amine associated receptor 5. (319 aa)
	LOC106602642	P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel. (406 aa)
	ENSSSAP00000106289	Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2. (333 aa)
	LOC106568409	Nucleoredoxin-like protein 2. (157 aa)
	GNAL	Guanine nucleotide-binding protein G(olf) subunit alpha-like. (630 aa)
	LOC106580969	Olfactory receptor. (316 aa)
	LOC106580967	Olfactory receptor 11A1-like. (310 aa)
	LOC106585656	P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel. (468 aa)
	LOC106588603	Calcium homeostasis modulator protein 1-like. (359 aa)
	salmOR600-1	Main olfactory receptor family F subfamily 115 member 2. (313 aa)
	ENSSSAP00000114852	annotation not available (261 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BBS4	LOC106591546	ENSSSAP00000079394	ENSSSAP00000005308	Bardet-Biedl syndrome 4 protein-like.	Tetratricopeptide repeat protein 8-like isoform X1.	0.973
BBS4	LOC106611037	ENSSSAP00000079394	ENSSSAP00000004712	Bardet-Biedl syndrome 4 protein-like.	Tetratricopeptide repeat protein 8-like isoform X1.	0.973
ENSSSAP00000021610	ENSSSAP00000025615	ENSSSAP00000021610	ENSSSAP00000025615	annotation not available	Guanine nucleotide-binding protein G(s) subunit alpha-like.	0.416
ENSSSAP00000021610	ENSSSAP00000066917	ENSSSAP00000021610	ENSSSAP00000066917	annotation not available	annotation not available	0.416
ENSSSAP00000021610	ENSSSAP00000072725	ENSSSAP00000021610	ENSSSAP00000072725	annotation not available	annotation not available	0.416
ENSSSAP00000021610	GNAL	ENSSSAP00000021610	ENSSSAP00000111640	annotation not available	Guanine nucleotide-binding protein G(olf) subunit alpha-like.	0.416
ENSSSAP00000021610	LOC106566693	ENSSSAP00000021610	ENSSSAP00000009349	annotation not available	Guanine nucleotide-binding protein G(S) subunit alpha-like.	0.416
ENSSSAP00000021610	LOC106568432	ENSSSAP00000021610	ENSSSAP00000049675	annotation not available	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.417
ENSSSAP00000021610	LOC106590334	ENSSSAP00000021610	ENSSSAP00000061889	annotation not available	Guanine nucleotide-binding protein G(Olf) subunit alpha isoform X1.	0.416
ENSSSAP00000021610	LOC106593968	ENSSSAP00000021610	ENSSSAP00000065921	annotation not available	Guanine nucleotide-binding protein G(S) subunit alpha-like.	0.416
ENSSSAP00000021610	LOC106596458	ENSSSAP00000021610	ENSSSAP00000051674	annotation not available	Guanine nucleotide-binding protein G(Olf) subunit alpha-like.	0.412
ENSSSAP00000021908	ENSSSAP00000025615	ENSSSAP00000021908	ENSSSAP00000025615	annotation not available	Guanine nucleotide-binding protein G(s) subunit alpha-like.	0.416
ENSSSAP00000021908	ENSSSAP00000066917	ENSSSAP00000021908	ENSSSAP00000066917	annotation not available	annotation not available	0.416
ENSSSAP00000021908	ENSSSAP00000072725	ENSSSAP00000021908	ENSSSAP00000072725	annotation not available	annotation not available	0.416
ENSSSAP00000021908	GNAL	ENSSSAP00000021908	ENSSSAP00000111640	annotation not available	Guanine nucleotide-binding protein G(olf) subunit alpha-like.	0.416
ENSSSAP00000021908	LOC106566693	ENSSSAP00000021908	ENSSSAP00000009349	annotation not available	Guanine nucleotide-binding protein G(S) subunit alpha-like.	0.416
ENSSSAP00000021908	LOC106568432	ENSSSAP00000021908	ENSSSAP00000049675	annotation not available	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.417
ENSSSAP00000021908	LOC106590334	ENSSSAP00000021908	ENSSSAP00000061889	annotation not available	Guanine nucleotide-binding protein G(Olf) subunit alpha isoform X1.	0.416
ENSSSAP00000021908	LOC106593968	ENSSSAP00000021908	ENSSSAP00000065921	annotation not available	Guanine nucleotide-binding protein G(S) subunit alpha-like.	0.416
ENSSSAP00000021908	LOC106596458	ENSSSAP00000021908	ENSSSAP00000051674	annotation not available	Guanine nucleotide-binding protein G(Olf) subunit alpha-like.	0.412