STRINGSTRING
rrh rrh LOC106608041 LOC106608041 LOC106578925 LOC106578925 opn4m1a1 opn4m1a1 opn4 opn4 opn1sw opn1sw opn5 opn5 LOC106582877 LOC106582877 LOC100136370 LOC100136370 ENSSSAP00000110237 ENSSSAP00000110237 ENSSSAP00000110164 ENSSSAP00000110164 LOC106576799 LOC106576799 LOC106607919 LOC106607919 LOC106597264 LOC106597264 LOC106583538 LOC106583538 ENSSSAP00000061267 ENSSSAP00000061267 LOC106596574 LOC106596574 LOC106608050 LOC106608050 ENSSSAP00000047459 ENSSSAP00000047459 LOC106571552 LOC106571552 LOC106590998 LOC106590998 LOC106613990 LOC106613990 LOC100136940 LOC100136940 LOC100136941 LOC100136941 LOC106591794 LOC106591794 LOC106605317 LOC106605317 ENSSSAP00000016842 ENSSSAP00000016842 RHO RHO LOC106578369 LOC106578369
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rrhVisual pigment-like receptor peropsin; Belongs to the G-protein coupled receptor 1 family. (334 aa)
LOC106608041Opsin-5-like; Belongs to the G-protein coupled receptor 1 family. Opsin subfamily. (375 aa)
LOC106578925melanopsin-A-like isoform X1; Belongs to the G-protein coupled receptor 1 family. (601 aa)
opn4m1a1Long melanopsin isoform X1. (577 aa)
opn4Melanopsin isoform X1. (562 aa)
opn1swShort wavelength-sensitive 1 opsin. (334 aa)
opn5Opsin-5. (342 aa)
LOC106582877Red-sensitive opsin-like. (357 aa)
LOC100136370Rhodopsin. (354 aa)
ENSSSAP00000110237Rhodopsin, like. (316 aa)
ENSSSAP00000110164Opsin 4b. (407 aa)
LOC106576799Opsin-3-like. (386 aa)
LOC106607919Opsin-5-like; Belongs to the G-protein coupled receptor 1 family. (356 aa)
LOC106597264LOW QUALITY PROTEIN: melanopsin-like; Belongs to the G-protein coupled receptor 1 family. (478 aa)
LOC106583538Rhodopsin. (347 aa)
ENSSSAP00000061267Opsin 1 (cone pigments), short-wave-sensitive 1. (304 aa)
LOC106596574Red-sensitive opsin-like. (330 aa)
LOC106608050Opsin-5-like. (365 aa)
ENSSSAP00000047459RPE-retinal G protein-coupled receptor-like. (275 aa)
LOC106571552Opsin-5-like; Belongs to the G-protein coupled receptor 1 family. (356 aa)
LOC106590998Red-sensitive opsin-like. (358 aa)
LOC106613990Probable G-protein coupled receptor 88. (278 aa)
LOC100136940Long wave-sensitive opsin isoform X1. (403 aa)
LOC100136941Short wave-sensitive opsin 2. (354 aa)
LOC106591794Visual pigment-like receptor peropsin. (306 aa)
LOC106605317Opsin-3-like. (395 aa)
ENSSSAP00000016842annotation not available (185 aa)
RHORhodopsin. (354 aa)
LOC106578369RPE-retinal G protein-coupled receptor-like. (295 aa)
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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