21 items (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSSAP00000038656	annotation not available (72 aa)
	LOC106576591-2	DNA-(apurinic or apyrimidinic site) lyase-like. (342 aa)
	LOC106591874	Exonuclease 3'-5' domain-containing protein 2-like. (550 aa)
	ENSSSAP00000035080	annotation not available (383 aa)
	tatdn1	Putative deoxyribonuclease TATDN1 isoform X1. (324 aa)
	LOC106601920	DNA polymerase delta catalytic subunit-like. (681 aa)
	ENSSSAP00000112721	annotation not available (332 aa)
	ENSSSAP00000105766	annotation not available (252 aa)
	LOC106567314	DNA-(Apurinic or apyrimidinic site) lyase 2-like. (299 aa)
	pole	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2292 aa)
	rexo2	Oligoribonuclease, mitochondrial. (289 aa)
	apex2	DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. (601 aa)
	Mre11	MRE11 homolog, double strand break repair nuclease. (452 aa)
	MRE11	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (474 aa)
	apex1	Salmo salar APEX nuclease (multifunctional DNA repair enzyme) 1 (apex1), mRNA. (344 aa)
	ENSSSAP00000047854	annotation not available (265 aa)
	DPOD1	DNA polymerase. (899 aa)
	ENSSSAP00000042491	annotation not available (750 aa)
	LOC106576591	DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. (342 aa)
	meiob	Meiosis-specific with OB domain-containing protein isoform X1. (464 aa)
	exd2	Exonuclease 3'-5' domain-containing protein 2. (421 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DPOD1	ENSSSAP00000035080	ENSSSAP00000045953	ENSSSAP00000035080	DNA polymerase.	annotation not available	0.583
DPOD1	ENSSSAP00000038656	ENSSSAP00000045953	ENSSSAP00000038656	DNA polymerase.	annotation not available	0.583
DPOD1	ENSSSAP00000042491	ENSSSAP00000045953	ENSSSAP00000042491	DNA polymerase.	annotation not available	0.583
DPOD1	ENSSSAP00000047854	ENSSSAP00000045953	ENSSSAP00000047854	DNA polymerase.	annotation not available	0.832
DPOD1	ENSSSAP00000105766	ENSSSAP00000045953	ENSSSAP00000105766	DNA polymerase.	annotation not available	0.583
DPOD1	ENSSSAP00000112721	ENSSSAP00000045953	ENSSSAP00000112721	DNA polymerase.	annotation not available	0.978
DPOD1	LOC106567314	ENSSSAP00000045953	ENSSSAP00000091945	DNA polymerase.	DNA-(Apurinic or apyrimidinic site) lyase 2-like.	0.651
DPOD1	LOC106576591	ENSSSAP00000045953	ENSSSAP00000013408	DNA polymerase.	DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends.	0.772
DPOD1	LOC106576591-2	ENSSSAP00000045953	ENSSSAP00000013613	DNA polymerase.	DNA-(apurinic or apyrimidinic site) lyase-like.	0.731
DPOD1	LOC106591874	ENSSSAP00000045953	ENSSSAP00000022366	DNA polymerase.	Exonuclease 3'-5' domain-containing protein 2-like.	0.505
DPOD1	LOC106601920	ENSSSAP00000045953	ENSSSAP00000032994	DNA polymerase.	DNA polymerase delta catalytic subunit-like.	0.901
DPOD1	MRE11	ENSSSAP00000045953	ENSSSAP00000067517	DNA polymerase.	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.	0.790
DPOD1	Mre11	ENSSSAP00000045953	ENSSSAP00000074445	DNA polymerase.	MRE11 homolog, double strand break repair nuclease.	0.790
DPOD1	apex1	ENSSSAP00000045953	ENSSSAP00000052174	DNA polymerase.	Salmo salar APEX nuclease (multifunctional DNA repair enzyme) 1 (apex1), mRNA.	0.731
DPOD1	apex2	ENSSSAP00000045953	ENSSSAP00000077558	DNA polymerase.	DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends.	0.651
DPOD1	exd2	ENSSSAP00000045953	ENSSSAP00000000072	DNA polymerase.	Exonuclease 3'-5' domain-containing protein 2.	0.505
DPOD1	meiob	ENSSSAP00000045953	ENSSSAP00000010976	DNA polymerase.	Meiosis-specific with OB domain-containing protein isoform X1.	0.832
DPOD1	pole	ENSSSAP00000045953	ENSSSAP00000085260	DNA polymerase.	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.	0.978
DPOD1	tatdn1	ENSSSAP00000045953	ENSSSAP00000030235	DNA polymerase.	Putative deoxyribonuclease TATDN1 isoform X1.	0.435
ENSSSAP00000035080	DPOD1	ENSSSAP00000035080	ENSSSAP00000045953	annotation not available	DNA polymerase.	0.583