STRINGSTRING
ENSSSAP00000106020 ENSSSAP00000106020 LOC100136559 LOC100136559 k0020 k0020 NANO1 NANO1 dnd1 dnd1 LOC106579738 LOC106579738 LOC100136364 LOC100136364 LOC106613337 LOC106613337 stau1 stau1 LOC100136366 LOC100136366 LOC106611616 LOC106611616 ENSSSAP00000105970 ENSSSAP00000105970 LOC106563563 LOC106563563 LOC106565337 LOC106565337
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSSSAP00000106020Nanos homolog 1. (235 aa)
LOC100136559Transforming growth factor beta; Belongs to the TGF-beta family. (381 aa)
k0020K0020 protein isoform X1. (646 aa)
NANO1Nanos homolog 1; Belongs to the nanos family. (226 aa)
dnd1Dead end. (366 aa)
LOC106579738Double-stranded RNA-binding protein Staufen homolog 2-like. (132 aa)
LOC100136364Cystic fibrosis transmembrane conductance regulator; Epithelial ion channel that plays an important role in the regulation of epithelial ion and water transport and fluid homeostasis. Mediates the transport of chloride ions across the cell membrane. Channel activity is coupled to ATP hydrolysis. The ion channel is also permeable to HCO(3-); selectivity depends on the extracellular chloride concentration. Exerts its function also by modulating the activity of other ion channels and transporters. Contributes to the regulation of the pH and the ion content of the epithelial fluid layer. (1542 aa)
LOC106613337Transforming growth factor beta; Belongs to the TGF-beta family. (384 aa)
stau1Double-stranded RNA-binding protein Staufen homolog 1. (703 aa)
LOC100136366Cystic fibrosis transmembrane conductance regulator; Epithelial ion channel that plays an important role in the regulation of epithelial ion and water transport and fluid homeostasis. Mediates the transport of chloride ions across the cell membrane. Channel activity is coupled to ATP hydrolysis. The ion channel is also permeable to HCO(3-); selectivity depends on the extracellular chloride concentration. Exerts its function also by modulating the activity of other ion channels and transporters. Contributes to the regulation of the pH and the ion content of the epithelial fluid layer. (1523 aa)
LOC106611616Nanos homolog 1-like; Belongs to the nanos family. (238 aa)
ENSSSAP00000105970Danio rerio pumilio RNA-binding family member 3 (pum3), mRNA. (410 aa)
LOC106563563Transforming growth factor beta; Belongs to the TGF-beta family. (390 aa)
LOC106565337Double-stranded RNA-binding protein Staufen homolog 1-like isoform X1. (707 aa)
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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