STRINGSTRING
inip inip LOC106596397 LOC106596397 brca2 brca2 ENSSSAP00000049806 ENSSSAP00000049806 ENSSSAP00000050168 ENSSSAP00000050168 ercc6 ercc6 ENSSSAP00000115468 ENSSSAP00000115468 cop1 cop1 LOC106561972 LOC106561972 LOC106574237 LOC106574237 LOC106593039 LOC106593039 LOC106613337 LOC106613337 LOC106583347 LOC106583347 LOC106587134 LOC106587134 LOC106585648 LOC106585648 LOC106581684 LOC106581684 LOC106577528 LOC106577528 ENSSSAP00000117653 ENSSSAP00000117653 ENSSSAP00000117674 ENSSSAP00000117674 fancd2 fancd2 LOC106599971 LOC106599971 LOC106567215 LOC106567215 LOC106578283 LOC106578283 xrcc4 xrcc4 rad9a rad9a ENSSSAP00000059858 ENSSSAP00000059858 LOC106607346 LOC106607346 ENSSSAP00000060415 ENSSSAP00000060415 LOC106568011 LOC106568011 RAD1 RAD1 ENSSSAP00000064605 ENSSSAP00000064605 ENSSSAP00000065200 ENSSSAP00000065200 LOC106582297 LOC106582297 ENSSSAP00000066696 ENSSSAP00000066696 ENSSSAP00000066770 ENSSSAP00000066770 ENSSSAP00000067658 ENSSSAP00000067658 ENSSSAP00000067693 ENSSSAP00000067693 ENSSSAP00000068563 ENSSSAP00000068563 STK11 STK11 ENSSSAP00000073229 ENSSSAP00000073229 LOC106607328 LOC106607328 ENSSSAP00000073552 ENSSSAP00000073552 LOC106580118 LOC106580118 ENSSSAP00000074156 ENSSSAP00000074156 atr atr LOC106613226 LOC106613226 mfs11 mfs11 ENSSSAP00000003228 ENSSSAP00000003228 ku70 ku70 ENSSSAP00000004860 ENSSSAP00000004860 LOC106604510 LOC106604510 LOC100136559 LOC100136559 LOC106610674 LOC106610674 LOC106609895 LOC106609895 LOC106607888 LOC106607888 face1 face1 LOC106569504 LOC106569504 LOC106602749 LOC106602749 smpd1 smpd1 ENSSSAP00000015576 ENSSSAP00000015576 ENSSSAP00000016990 ENSSSAP00000016990 LOC106576420 LOC106576420 LOC106610025 LOC106610025 LOC106570353 LOC106570353 LOC106562352 LOC106562352 LOC106563167 LOC106563167 babam2 babam2 ENSSSAP00000019688 ENSSSAP00000019688 cl032 cl032 ticrr ticrr ENSSSAP00000020795 ENSSSAP00000020795 DNSL3-2 DNSL3-2 ENSSSAP00000022346 ENSSSAP00000022346 brcc3 brcc3 LOC106603421 LOC106603421 LOC106575791 LOC106575791 ENSSSAP00000025150 ENSSSAP00000025150 LOC106601126 LOC106601126 LOC106593795 LOC106593795 lig4 lig4 ENSSSAP00000030324 ENSSSAP00000030324 rnf8 rnf8 ENSSSAP00000074925 ENSSSAP00000074925 ENSSSAP00000030774 ENSSSAP00000030774 ENSSSAP00000031057 ENSSSAP00000031057 babam1 babam1 LOC106601112 LOC106601112 sirt1 sirt1 LOC106600668 LOC106600668 ENSSSAP00000034587 ENSSSAP00000034587 STK11-2 STK11-2 FBX4 FBX4 LOC106590185 LOC106590185 LOC106598796 LOC106598796 wrn wrn DNSL3 DNSL3 LOC106608272 LOC106608272 ptprc ptprc ENSSSAP00000079966 ENSSSAP00000079966 ENSSSAP00000080183 ENSSSAP00000080183 LOC106583694 LOC106583694 LOC106584172 LOC106584172 ENSSSAP00000088143 ENSSSAP00000088143 LOC106584307 LOC106584307 spidr spidr LOC106589035 LOC106589035 ect2 ect2 LOC106569880 LOC106569880 LOC106581757 LOC106581757 LOC106581758 LOC106581758 LOC100380865 LOC100380865 ercc8 ercc8 LOC106579247 LOC106579247 ENSSSAP00000094070 ENSSSAP00000094070 LOC106580664 LOC106580664 abraxas1 abraxas1 LOC106568576 LOC106568576 LOC106578660 LOC106578660 LOC106585761 LOC106585761 LOC106572465 LOC106572465 cssa09h5orf45 cssa09h5orf45 XRCC2 XRCC2 LOC106566498 LOC106566498 LOC106579593 LOC106579593 msh2 msh2 abcg5 abcg5 LOC106602586 LOC106602586 ENSSSAP00000101354 ENSSSAP00000101354 ercc1 ercc1 ENSSSAP00000103411 ENSSSAP00000103411 ENSSSAP00000103639 ENSSSAP00000103639 LOC106587184 LOC106587184 ENSSSAP00000105257 ENSSSAP00000105257 brca1 brca1 ENSSSAP00000107681 ENSSSAP00000107681 LOC106599248 LOC106599248 LOC106603169 LOC106603169 LOC106563563 LOC106563563 blm blm tank tank rad9b rad9b LOC106569189 LOC106569189 LOC106586184 LOC106586184 BCL2 BCL2 LOC106588323 LOC106588323 LOC106569074 LOC106569074 rad51 rad51 LOC106608591 LOC106608591 atm atm LOC106575165 LOC106575165 NABP2 NABP2 ENSSSAP00000046409 ENSSSAP00000046409 LOC106562517 LOC106562517
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
inipSOSS complex subunit C; Component of the SOSS complex, a multiprotein complex that functions downstream of the MRN complex to promote DNA repair and G2/M checkpoint. The SOSS complex associates with single-stranded DNA at DNA lesions and influences diverse endpoints in the cellular DNA damage response including cell-cycle checkpoint activation, recombinational repair and maintenance of genomic stability. Required for efficient homologous recombination-dependent repair of double-strand breaks (DSBs) (By similarity). (109 aa)
LOC106596397Amyloid beta A4 precursor protein-binding family A member 1-like. (923 aa)
brca2Breast cancer type 2 susceptibility protein isoform X5. (2826 aa)
ENSSSAP00000049806annotation not available (1015 aa)
ENSSSAP00000050168annotation not available (1176 aa)
ercc6DNA excision repair protein ERCC-6. (1488 aa)
ENSSSAP00000115468X-ray repair complementing defective repair in Chinese hamster cells 6. (364 aa)
cop1E3 ubiquitin-protein ligase RFWD2 isoform X1. (732 aa)
LOC106561972Apoptosis regulator BAX-like. (204 aa)
LOC106574237Integrin beta; Belongs to the integrin beta chain family. (795 aa)
LOC106593039BRCA1-associated ATM activator 1-like. (233 aa)
LOC106613337Transforming growth factor beta; Belongs to the TGF-beta family. (384 aa)
LOC106583347SOSS complex subunit B1-like. (193 aa)
LOC106587134Apoptosis regulator BAX-like. (204 aa)
LOC106585648Serine/threonine-protein kinase Chk2-like isoform X2. (546 aa)
LOC106581684SOSS complex subunit B2-like. (217 aa)
LOC106577528Menin-like. (621 aa)
ENSSSAP00000117653annotation not available (1164 aa)
ENSSSAP00000117674annotation not available (417 aa)
fancd2Fanconi anemia group D2 protein. (1490 aa)
LOC106599971Serine/threonine-protein kinase STK11-like; Belongs to the protein kinase superfamily. (433 aa)
LOC106567215DNA (Cytosine-5)-methyltransferase 3A-like isoform X3; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (1531 aa)
LOC106578283DCN1-like protein. (338 aa)
xrcc4DNA repair protein XRCC4 isoform X2. (336 aa)
rad9aCell cycle checkpoint control protein; Belongs to the rad9 family. (393 aa)
ENSSSAP00000059858annotation not available (300 aa)
LOC106607346UNC93-like protein MFSD11. (448 aa)
ENSSSAP00000060415annotation not available (971 aa)
LOC106568011BRCA1-A complex subunit RAP80-like isoform X1. (1164 aa)
RAD1Cell cycle checkpoint protein RAD1. (279 aa)
ENSSSAP00000064605annotation not available (137 aa)
ENSSSAP00000065200annotation not available (1319 aa)
LOC106582297BRCA1-associated RING domain protein 1-like isoform X1. (847 aa)
ENSSSAP00000066696annotation not available (247 aa)
ENSSSAP00000066770annotation not available (468 aa)
ENSSSAP00000067658annotation not available (174 aa)
ENSSSAP00000067693annotation not available (154 aa)
ENSSSAP00000068563annotation not available (782 aa)
STK11Serine/threonine-protein kinase STK11-like. (330 aa)
ENSSSAP00000073229annotation not available (145 aa)
LOC106607328Apoptosis regulator BAX-like. (194 aa)
ENSSSAP00000073552annotation not available (175 aa)
LOC106580118Serine/threonine-protein kinase Chk2-like isoform X1. (508 aa)
ENSSSAP00000074156annotation not available (911 aa)
atrSerine/threonine-protein kinase ATR; Belongs to the PI3/PI4-kinase family. (2476 aa)
LOC106613226Secreted frizzled-related protein 2-like. (317 aa)
mfs11UNC93-like protein MFSD11. (453 aa)
ENSSSAP00000003228annotation not available (187 aa)
ku70ATP-dependent DNA helicase 2 subunit 1 isoform X1. (619 aa)
ENSSSAP00000004860annotation not available (380 aa)
LOC106604510NAD-dependent protein deacetylase sirtuin-1-like isoform X2. (713 aa)
LOC100136559Transforming growth factor beta; Belongs to the TGF-beta family. (381 aa)
LOC106610674Lysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. (828 aa)
LOC106609895Transmembrane protein 109-like. (220 aa)
LOC106607888DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...] (339 aa)
face1CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family. (513 aa)
LOC106569504Mitogen-activated protein kinase kinase kinase MLT. (483 aa)
LOC106602749Secreted frizzled-related protein 2-like. (293 aa)
smpd1Sphingomyelin phosphodiesterase; Converts sphingomyelin to ceramide. (612 aa)
ENSSSAP00000015576Abraxas 1, BRCA1 A complex subunit. (377 aa)
ENSSSAP00000016990annotation not available (257 aa)
LOC106576420Uncharacterized protein LOC106576420. (316 aa)
LOC106610025Secreted frizzled-related protein 2-like. (293 aa)
LOC106570353Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. (627 aa)
LOC106562352Lysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. (866 aa)
LOC106563167CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family. (468 aa)
babam2BRCA1-A complex subunit BRE. (454 aa)
ENSSSAP00000019688annotation not available (790 aa)
cl032C12orf32 homolog. (316 aa)
ticrrTreslin isoform X2. (1909 aa)
ENSSSAP00000020795annotation not available (1267 aa)
DNSL3-2Deoxyribonuclease-1-like protein. (238 aa)
ENSSSAP00000022346annotation not available (1267 aa)
brcc3Lys-63-specific deubiquitinase BRCC36; Metalloprotease that specifically cleaves 'Lys-63'-linked polyubiquitin chains. Does not have activity toward 'Lys-48'-linked polyubiquitin chains. Component of the BRCA1-A complex, a complex that specifically recognizes 'Lys-63'-linked ubiquitinated histones H2A and H2AX at DNA lesions sites, leading to target the brca1-bard1 heterodimer to sites of DNA damage at double-strand breaks (DSBs). In the BRCA1-A complex, it specifically removes 'Lys-63'-linked ubiquitin on histones H2A and H2AX, antagonizing the rnf8-dependent ubiquitination at double- [...] (260 aa)
LOC106603421BRCA1-A complex subunit RAP80-like. (1105 aa)
LOC106575791SOSS complex subunit B2-like. (203 aa)
ENSSSAP00000025150annotation not available (92 aa)
LOC106601126Apoptosis regulator BAX-like. (225 aa)
LOC106593795BRCA1-associated ATM activator 1-like. (89 aa)
lig4DNA ligase. (927 aa)
ENSSSAP00000030324annotation not available (845 aa)
rnf8E3 ubiquitin-protein ligase RNF8; E3 ubiquitin-protein ligase that plays a key role in DNA damage signaling via 2 distinct roles: by mediating the 'Lys-63'-linked ubiquitination of histones H2A and H2AX and promoting the recruitment of DNA repair proteins at double-strand breaks (DSBs) sites, and by catalyzing 'Lys-48'-linked ubiquitination to remove target proteins from DNA damage sites. Following DNA DSBs, it is recruited to the sites of damage by ATM-phosphorylated MDC1 and catalyzes the 'Lys-63'-linked ubiquitination of histones H2A and H2AX, thereby promoting the formation of TP53 [...] (538 aa)
ENSSSAP00000074925annotation not available (436 aa)
ENSSSAP00000030774annotation not available (144 aa)
ENSSSAP00000031057annotation not available (257 aa)
babam1BRISC and BRCA1-A complex member 1. (373 aa)
LOC106601112UNC93-like protein MFSD11. (464 aa)
sirt1NAD-dependent protein deacetylase sirtuin-1. (783 aa)
LOC106600668Uncharacterized protein LOC106600668. (847 aa)
ENSSSAP00000034587annotation not available (78 aa)
STK11-2Serine/threonine-protein kinase STK11-like isoform X1; Belongs to the protein kinase superfamily. (427 aa)
FBX4F-box only protein 4. (408 aa)
LOC106590185DNA topoisomerase 2-binding protein 1-A-like. (1534 aa)
LOC106598796Deoxyribonuclease; Belongs to the DNase I family. (278 aa)
wrnWerner syndrome ATP-dependent helicase isoform X2. (1467 aa)
DNSL3Deoxyribonuclease; Belongs to the DNase I family. (352 aa)
LOC106608272DNA helicase INO80-like isoform X2. (1279 aa)
ptprcReceptor-type tyrosine-protein phosphatase C isoform X1. (1412 aa)
ENSSSAP00000079966annotation not available (1325 aa)
ENSSSAP00000080183annotation not available (109 aa)
LOC106583694Deoxyribonuclease; Belongs to the DNase I family. (303 aa)
LOC106584172Growth arrest and DNA damage-inducible protein GADD45 alpha-like. (157 aa)
ENSSSAP00000088143annotation not available (1274 aa)
LOC106584307Protein ECT2-like isoform X1. (1012 aa)
spidrDNA repair-scaffolding protein. (990 aa)
LOC106589035Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. (667 aa)
ect2Protein ECT2 isoform X1. (1084 aa)
LOC106569880Integrator complex subunit 3-like isoform X2. (1031 aa)
LOC106581757Mitogen-activated protein kinase kinase kinase MLT-like isoform X1. (855 aa)
LOC106581758Cell division cycle-associated protein 7-like isoform X2. (399 aa)
LOC100380865Lysine--tRNA ligase. (644 aa)
ercc8DNA excision repair protein ERCC-8 isoform X1. (400 aa)
LOC106579247DCN1-like protein. (333 aa)
ENSSSAP00000094070annotation not available (89 aa)
LOC106580664E3 ubiquitin-protein ligase RNF168; E3 ubiquitin-protein ligase required for accumulation of repair proteins to sites of DNA damage. Acts with UBE2N/UBC13 to amplify the RNF8-dependent histone ubiquitination. Recruited to sites of DNA damage at double-strand breaks (DSBs) by binding to ubiquitinated histone H2A and ubiquitinates histone H2A and H2AX, leading to amplify the RNF8-dependent H2A ubiquitination and promoting the formation of 'Lys-63'-linked ubiquitin conjugates. This leads to concentrate ubiquitinated histones H2A and H2AX at DNA lesions to the threshold required for recrui [...] (557 aa)
abraxas1BRCA1-A complex subunit Abraxas 1; Involved in DNA damage response and double-strand break (DSB) repair. Component of the BRCA1-A complex, acting as a central scaffold protein that assembles the various components of the complex and mediates the recruitment of brca1. The BRCA1-A complex specifically recognizes 'Lys-63'-linked ubiquitinated histones H2A and H2AX at DNA lesion sites, leading to target the brca1-bard1 heterodimer to sites of DNA damage at DSBs. This complex also possesses deubiquitinase activity that specifically removes 'Lys-63'-linked ubiquitin on histones H2A and H2AX [...] (404 aa)
LOC106568576SOSS complex subunit C-like. (80 aa)
LOC106578660DNA topoisomerase 2-binding protein 1-A-like isoform X1. (1446 aa)
LOC106585761DNA repair protein XRCC4-like isoform X1. (317 aa)
LOC106572465DNA (Cytosine-5)-methyltransferase 3A-like isoform X2; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (1783 aa)
cssa09h5orf45UPF0544 protein C5orf45 homolog isoform X1. (100 aa)
XRCC2DNA repair protein XRCC2-like. (307 aa)
LOC106566498ETS domain-containing protein Elk-1-like isoform X1. (544 aa)
LOC106579593Apoptosis regulator Bcl-2-like. (228 aa)
msh2DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (928 aa)
abcg5ATP-binding cassette sub-family G member 5. (698 aa)
LOC106602586Transmembrane protein 109-like. (225 aa)
ENSSSAP00000101354annotation not available (348 aa)
ercc1DNA excision repair protein ERCC-1. (383 aa)
ENSSSAP00000103411annotation not available (112 aa)
ENSSSAP00000103639annotation not available (819 aa)
LOC106587184Lysine--tRNA ligase. (603 aa)
ENSSSAP00000105257Serine-protein kinase ATM-like. (111 aa)
brca1Breast cancer type 1 susceptibility protein isoform X2. (1567 aa)
ENSSSAP00000107681annotation not available (681 aa)
LOC106599248Apoptosis regulator Bcl-2-like. (226 aa)
LOC106603169Lys-63-specific deubiquitinase BRCC36-like isoform X1. (260 aa)
LOC106563563Transforming growth factor beta; Belongs to the TGF-beta family. (390 aa)
blmBloom syndrome protein isoform X1. (1471 aa)
tankLOW QUALITY PROTEIN: TRAF family member-associated NF-kappa-B activator. (332 aa)
rad9bCell cycle checkpoint control protein RAD9B. (301 aa)
LOC106569189Apoptosis regulator Bcl-2-like isoform X2. (226 aa)
LOC106586184TRAF family member-associated NF-kappa-B activator-like isoform X1. (361 aa)
BCL2Apoptosis regulator Bcl-2-like. (230 aa)
LOC106588323Integrator complex subunit 3 isoform X2. (1031 aa)
LOC106569074E3 ubiquitin-protein ligase RFWD2-like isoform X3. (739 aa)
rad51DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...] (340 aa)
LOC106608591Menin-like isoform X1. (620 aa)
atmNon-specific serine/threonine protein kinase. (3172 aa)
LOC106575165Integrin beta; Belongs to the integrin beta chain family. (774 aa)
NABP2SOSS complex subunit B1-B-like isoform X1. (199 aa)
ENSSSAP00000046409DNA (cytosine-5)-methyltransferase 3A-like. (146 aa)
LOC106562517Tumor suppressor p53-binding protein 1-like isoform X3. (1923 aa)
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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