15 items (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106604082	Endothelin B receptor-like; Belongs to the G-protein coupled receptor 1 family. (427 aa)
	LOC106579593	Apoptosis regulator Bcl-2-like. (228 aa)
	ENSSSAP00000104012	Endothelin receptor type Bb. (341 aa)
	LOC106599248	Apoptosis regulator Bcl-2-like. (226 aa)
	LOC106569189	Apoptosis regulator Bcl-2-like isoform X2. (226 aa)
	BCL2	Apoptosis regulator Bcl-2-like. (230 aa)
	LOC106611646	RE1-silencing transcription factor-like. (1088 aa)
	LOC106569464	Kidney mitochondrial carrier protein 1-like; Belongs to the mitochondrial carrier (TC 2.A.29) family. (528 aa)
	LOC106576823	Proto-oncogene tyrosine-protein kinase receptor Ret; Receptor tyrosine-protein kinase involved in numerous cellular mechanisms including cell proliferation, neuronal navigation, cell migration, and cell differentiation upon binding with glial cell derived neurotrophic factor family ligands. (1112 aa)
	LOC106586839	Endothelin B receptor-like. (473 aa)
	LOC106604639	RE1-silencing transcription factor B-like. (985 aa)
	lrrc45	Leucine-rich repeat-containing protein 45 isoform X1. (715 aa)
	LOC106600156	Endothelin B receptor-like; Belongs to the G-protein coupled receptor 1 family. (421 aa)
	lrrk2	Leucine-rich repeat serine/threonine-protein kinase 2 isoform X2. (2564 aa)
	ENSSSAP00000012992	Ret proto-oncogene receptor tyrosine kinase. (1109 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC106569464	LOC106600156	ENSSSAP00000053046	ENSSSAP00000035222	Kidney mitochondrial carrier protein 1-like; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Endothelin B receptor-like; Belongs to the G-protein coupled receptor 1 family.	0.900
LOC106569464	LOC106604082	ENSSSAP00000053046	ENSSSAP00000002874	Kidney mitochondrial carrier protein 1-like; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Endothelin B receptor-like; Belongs to the G-protein coupled receptor 1 family.	0.900
LOC106600156	LOC106569464	ENSSSAP00000035222	ENSSSAP00000053046	Endothelin B receptor-like; Belongs to the G-protein coupled receptor 1 family.	Kidney mitochondrial carrier protein 1-like; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.900
LOC106600156	LOC106604082	ENSSSAP00000035222	ENSSSAP00000002874	Endothelin B receptor-like; Belongs to the G-protein coupled receptor 1 family.	Endothelin B receptor-like; Belongs to the G-protein coupled receptor 1 family.	0.901
LOC106604082	LOC106569464	ENSSSAP00000002874	ENSSSAP00000053046	Endothelin B receptor-like; Belongs to the G-protein coupled receptor 1 family.	Kidney mitochondrial carrier protein 1-like; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.900
LOC106604082	LOC106600156	ENSSSAP00000002874	ENSSSAP00000035222	Endothelin B receptor-like; Belongs to the G-protein coupled receptor 1 family.	Endothelin B receptor-like; Belongs to the G-protein coupled receptor 1 family.	0.901