23 items (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106601002	Protein phosphatase 1 regulatory subunit 1B-like. (177 aa)
	LOC106609689	Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family. (520 aa)
	LOC106570392	Endothelin-1-like. (203 aa)
	LOC106562687	D(4) dopamine receptor-like; Belongs to the G-protein coupled receptor 1 family. (347 aa)
	ENSSSAP00000020686	annotation not available (141 aa)
	ENSSSAP00000020985	annotation not available (246 aa)
	uros	uroporphyrinogen-III synthase isoform X2. (168 aa)
	LOC106577883	Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family. (626 aa)
	LOC106578207	Endothelin-1 receptor-like. (222 aa)
	LOC100194587	Protein phosphatase 1, regulatory (Inhibitor) subunit 1b-like isoform X1. (217 aa)
	PPP1R1B	Protein phosphatase 1 regulatory inhibitor subunit 1B. (139 aa)
	adamts13	A disintegrin and metalloproteinase with thrombospondin motifs 13. (1569 aa)
	LOC106584511	D(4) dopamine receptor-like; Belongs to the G-protein coupled receptor 1 family. (467 aa)
	LOC106609138	D(4) dopamine receptor-like isoform X1; Belongs to the G-protein coupled receptor 1 family. (435 aa)
	ENSSSAP00000065513	Uroporphyrinogen III synthase. (167 aa)
	ENSSSAP00000065805	Uroporphyrinogen III synthase. (158 aa)
	LOC106589028	Uncharacterized protein LOC106589028. (275 aa)
	LOC106608940	Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family. (630 aa)
	GLDC	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. (1029 aa)
	LOC106576100	D(4) dopamine receptor-like; Belongs to the G-protein coupled receptor 1 family. (407 aa)
	trdmt1	tRNA (Cytosine(38)-C(5))-methyltransferase isoform X1; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (388 aa)
	LOC106610223	Endothelin B receptor-like; Belongs to the G-protein coupled receptor 1 family. (481 aa)
	LOC106580033	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. (1029 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GLDC	LOC106580033	ENSSSAP00000086890	ENSSSAP00000116207	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	0.900
LOC106570392	LOC106578207	ENSSSAP00000019078	ENSSSAP00000041268	Endothelin-1-like.	Endothelin-1 receptor-like.	0.985
LOC106570392	LOC106589028	ENSSSAP00000019078	ENSSSAP00000076828	Endothelin-1-like.	Uncharacterized protein LOC106589028.	0.900
LOC106570392	LOC106610223	ENSSSAP00000019078	ENSSSAP00000104145	Endothelin-1-like.	Endothelin B receptor-like; Belongs to the G-protein coupled receptor 1 family.	0.998
LOC106577883	LOC106608940	ENSSSAP00000038558	ENSSSAP00000082404	Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.	Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.	0.900
LOC106577883	LOC106609689	ENSSSAP00000038558	ENSSSAP00000012690	Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.	Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.	0.912
LOC106578207	LOC106570392	ENSSSAP00000041268	ENSSSAP00000019078	Endothelin-1 receptor-like.	Endothelin-1-like.	0.985
LOC106578207	LOC106589028	ENSSSAP00000041268	ENSSSAP00000076828	Endothelin-1 receptor-like.	Uncharacterized protein LOC106589028.	0.985
LOC106580033	GLDC	ENSSSAP00000116207	ENSSSAP00000086890	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	0.900
LOC106589028	LOC106570392	ENSSSAP00000076828	ENSSSAP00000019078	Uncharacterized protein LOC106589028.	Endothelin-1-like.	0.900
LOC106589028	LOC106578207	ENSSSAP00000076828	ENSSSAP00000041268	Uncharacterized protein LOC106589028.	Endothelin-1 receptor-like.	0.985
LOC106589028	LOC106610223	ENSSSAP00000076828	ENSSSAP00000104145	Uncharacterized protein LOC106589028.	Endothelin B receptor-like; Belongs to the G-protein coupled receptor 1 family.	0.998
LOC106608940	LOC106577883	ENSSSAP00000082404	ENSSSAP00000038558	Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.	Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.	0.900
LOC106608940	LOC106609689	ENSSSAP00000082404	ENSSSAP00000012690	Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.	Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.	0.912
LOC106609689	LOC106577883	ENSSSAP00000012690	ENSSSAP00000038558	Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.	Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.	0.912
LOC106609689	LOC106608940	ENSSSAP00000012690	ENSSSAP00000082404	Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.	Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.	0.912
LOC106610223	LOC106570392	ENSSSAP00000104145	ENSSSAP00000019078	Endothelin B receptor-like; Belongs to the G-protein coupled receptor 1 family.	Endothelin-1-like.	0.998
LOC106610223	LOC106589028	ENSSSAP00000104145	ENSSSAP00000076828	Endothelin B receptor-like; Belongs to the G-protein coupled receptor 1 family.	Uncharacterized protein LOC106589028.	0.998