(33 nodes) syntaxin-1 binding network (Salmo salar)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSSAP00000090481	annotation not available (192 aa)
	UNC13C	Protein unc-13 homolog C-like. (1453 aa)
	LOC106566447	Syntaphilin-like. (824 aa)
	nsf	Vesicle-fusing ATPase isoform X1. (773 aa)
	ENSSSAP00000054489	Syntaxin binding protein 1b. (598 aa)
	stxbp3	Syntaxin-binding protein 3; Belongs to the STXBP/unc-18/SEC1 family. (598 aa)
	LOC106583782	Syntabulin-like isoform X1. (654 aa)
	LOC106570851	Protein unc-13 homolog B-like. (1595 aa)
	LOC106583880	Vesicle-fusing ATPase-like. (766 aa)
	LOC106562407	Protein unc-13 homolog C-like. (1364 aa)
	LOC106585214	Syntaxin-binding protein 1-like isoform X1; Belongs to the STXBP/unc-18/SEC1 family. (661 aa)
	LOC106600924	Syntaxin-binding protein 2-like; Belongs to the STXBP/unc-18/SEC1 family. (589 aa)
	ENSSSAP00000037499	Proline-rich transmembrane protein 2. (172 aa)
	LOC106563215	Protein unc-13 homolog B-like isoform X2. (1927 aa)
	LOC106613770	Protein unc-13 homolog A-like. (1596 aa)
	LOC106584438	Protein unc-13 homolog A-like isoform X9. (1618 aa)
	ENSSSAP00000022163	Syntaxin binding protein 1a. (562 aa)
	sybu	Syntabulin. (615 aa)
	UNC13B	Protein unc-13 homolog B-like isoform X20. (3538 aa)
	LOC106600749	Tumor suppressor candidate 5 homolog. (201 aa)
	LOC106611384	Synaptosomal-associated protein; Belongs to the SNAP-25 family. (209 aa)
	ENSSSAP00000011354	Syntaxin binding protein 2. (424 aa)
	SNPH	Syntaphilin-like isoform X1. (754 aa)
	lrrk2	Leucine-rich repeat serine/threonine-protein kinase 2 isoform X2. (2564 aa)
	LOC106563129	Syntaxin-binding protein 1-like isoform X1; Belongs to the STXBP/unc-18/SEC1 family. (605 aa)
	LOC106569526	Protein unc-13 homolog A-like isoform X3. (1658 aa)
	LOC106600004	Protein unc-13 homolog A-like isoform X3. (1613 aa)
	ENSSSAP00000100004	N-ethylmaleimide-sensitive factor b. (747 aa)
	ENSSSAP00000018596	annotation not available (164 aa)
	ENSSSAP00000093245	annotation not available (1499 aa)
	ENSSSAP00000101766	annotation not available (139 aa)
	vamp3	Vesicle-associated membrane protein 3. (101 aa)
	LOC106579324	Vesicle-fusing ATPase. (747 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSSAP00000011354	ENSSSAP00000090481	ENSSSAP00000011354	ENSSSAP00000090481	Syntaxin binding protein 2.	annotation not available	0.863
ENSSSAP00000011354	ENSSSAP00000093245	ENSSSAP00000011354	ENSSSAP00000093245	Syntaxin binding protein 2.	annotation not available	0.600
ENSSSAP00000011354	LOC106562407	ENSSSAP00000011354	ENSSSAP00000041629	Syntaxin binding protein 2.	Protein unc-13 homolog C-like.	0.600
ENSSSAP00000011354	LOC106563215	ENSSSAP00000011354	ENSSSAP00000037292	Syntaxin binding protein 2.	Protein unc-13 homolog B-like isoform X2.	0.600
ENSSSAP00000011354	LOC106569526	ENSSSAP00000011354	ENSSSAP00000116982	Syntaxin binding protein 2.	Protein unc-13 homolog A-like isoform X3.	0.600
ENSSSAP00000011354	LOC106570851	ENSSSAP00000011354	ENSSSAP00000048812	Syntaxin binding protein 2.	Protein unc-13 homolog B-like.	0.600
ENSSSAP00000011354	LOC106584438	ENSSSAP00000011354	ENSSSAP00000023116	Syntaxin binding protein 2.	Protein unc-13 homolog A-like isoform X9.	0.600
ENSSSAP00000011354	LOC106600004	ENSSSAP00000011354	ENSSSAP00000119248	Syntaxin binding protein 2.	Protein unc-13 homolog A-like isoform X3.	0.600
ENSSSAP00000011354	LOC106611384	ENSSSAP00000011354	ENSSSAP00000006575	Syntaxin binding protein 2.	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	0.863
ENSSSAP00000011354	LOC106613770	ENSSSAP00000011354	ENSSSAP00000023509	Syntaxin binding protein 2.	Protein unc-13 homolog A-like.	0.600
ENSSSAP00000011354	UNC13B	ENSSSAP00000011354	ENSSSAP00000004760	Syntaxin binding protein 2.	Protein unc-13 homolog B-like isoform X20.	0.600
ENSSSAP00000011354	UNC13C	ENSSSAP00000011354	ENSSSAP00000087632	Syntaxin binding protein 2.	Protein unc-13 homolog C-like.	0.600
ENSSSAP00000011354	vamp3	ENSSSAP00000011354	ENSSSAP00000109554	Syntaxin binding protein 2.	Vesicle-associated membrane protein 3.	0.771
ENSSSAP00000018596	ENSSSAP00000090481	ENSSSAP00000018596	ENSSSAP00000090481	annotation not available	annotation not available	0.820
ENSSSAP00000018596	ENSSSAP00000093245	ENSSSAP00000018596	ENSSSAP00000093245	annotation not available	annotation not available	0.559
ENSSSAP00000018596	LOC106562407	ENSSSAP00000018596	ENSSSAP00000041629	annotation not available	Protein unc-13 homolog C-like.	0.559
ENSSSAP00000018596	LOC106563215	ENSSSAP00000018596	ENSSSAP00000037292	annotation not available	Protein unc-13 homolog B-like isoform X2.	0.559
ENSSSAP00000018596	LOC106569526	ENSSSAP00000018596	ENSSSAP00000116982	annotation not available	Protein unc-13 homolog A-like isoform X3.	0.559
ENSSSAP00000018596	LOC106570851	ENSSSAP00000018596	ENSSSAP00000048812	annotation not available	Protein unc-13 homolog B-like.	0.559
ENSSSAP00000018596	LOC106584438	ENSSSAP00000018596	ENSSSAP00000023116	annotation not available	Protein unc-13 homolog A-like isoform X9.	0.559