STRINGSTRING
LOC106602420 LOC106602420 ttc21b ttc21b armc4 armc4 LOC106560349 LOC106560349 CDH2-2 CDH2-2 ENSSSAP00000113117 ENSSSAP00000113117 LOC106611782 LOC106611782 LOC106611503 LOC106611503 LOC106567052 LOC106567052 cc134 cc134 LOC106609329 LOC106609329 LOC106571669 LOC106571669 LOC106572674 LOC106572674 BBS4 BBS4 LOC106602535 LOC106602535 rpgrip1l rpgrip1l hydin hydin LOC106604686 LOC106604686 LOC106560769 LOC106560769 LOC106604460 LOC106604460 ENSSSAP00000071238 ENSSSAP00000071238 LOC106584192 LOC106584192 aqp1 aqp1 LOC106569327 LOC106569327 rapgef2 rapgef2 LOC106612098 LOC106612098 ENSSSAP00000064257 ENSSSAP00000064257 LOC106566345 LOC106566345 LOC106604356 LOC106604356 ENSSSAP00000058739 ENSSSAP00000058739 ENSSSAP00000056455 ENSSSAP00000056455 LOC106611555 LOC106611555 LOC106580830 LOC106580830 LOC106572920 LOC106572920 LOC106569598 LOC106569598 rfng rfng LOC106608214 LOC106608214 mnat1 mnat1 LOC106612624 LOC106612624 LOC106600503 LOC106600503 arnt2 arnt2 ENSSSAP00000027669 ENSSSAP00000027669 uchl5 uchl5 LOC106584153 LOC106584153 LOC106609505 LOC106609505 ENSSSAP00000018920 ENSSSAP00000018920 ENSSSAP00000017612 ENSSSAP00000017612 ENSSSAP00000017583 ENSSSAP00000017583 ENSSSAP00000014757 ENSSSAP00000014757 LOC106605812 LOC106605812 LOC106611266 LOC106611266 LOC106611270 LOC106611270 cenpf cenpf RFNG RFNG CDH2 CDH2 CCDC134 CCDC134 dpcd dpcd ENSSSAP00000000686 ENSSSAP00000000686 LOC106600435 LOC106600435
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC106602420Endoribonuclease Dicer-like isoform X1; Belongs to the helicase family. Dicer subfamily. (1995 aa)
ttc21bTetratricopeptide repeat protein 21B. (1326 aa)
armc4Armadillo repeat-containing protein 4. (1070 aa)
LOC106560349Cadherin-2-like; Cadherins are calcium-dependent cell adhesion proteins. (920 aa)
CDH2-2Cadherin-2-like; Cadherins are calcium-dependent cell adhesion proteins. (948 aa)
ENSSSAP00000113117annotation not available (172 aa)
LOC106611782Cystine/glutamate transporter-like. (550 aa)
LOC106611503Mediator of RNA polymerase II transcription subunit 12. (2069 aa)
LOC106567052Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (375 aa)
cc134Coiled-coil domain-containing protein 134 isoform X2. (271 aa)
LOC106609329Aryl hydrocarbon receptor nuclear translocator-like isoform X1. (260 aa)
LOC106571669MAGUK p55 subfamily member 5-A-like; Belongs to the MAGUK family. (684 aa)
LOC106572674Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (388 aa)
BBS4Bardet-Biedl syndrome 4 protein-like. (523 aa)
LOC106602535MAGUK p55 subfamily member 5-A-like; Belongs to the MAGUK family. (697 aa)
rpgrip1lProtein fantom. (1330 aa)
hydinHydrocephalus-inducing protein homolog isoform X1. (4705 aa)
LOC106604686Cystine/glutamate transporter-like isoform X2. (522 aa)
LOC106560769Bardet-Biedl syndrome 4 protein-like isoform X1. (526 aa)
LOC106604460Mediator of RNA polymerase II transcription subunit 12-like. (2151 aa)
ENSSSAP00000071238Rap guanine nucleotide exchange factor (GEF) 6. (1528 aa)
LOC106584192Cadherin 2, type 1, N-cadherin. (928 aa)
aqp1Aquaporin-1; Belongs to the MIP/aquaporin (TC 1.A.8) family. (262 aa)
LOC106569327Aquaporin FA-CHIP-like; Belongs to the MIP/aquaporin (TC 1.A.8) family. (261 aa)
rapgef2Rap guanine nucleotide exchange factor 2 isoform X8. (1673 aa)
LOC106612098Trichohyalin-like isoform X1. (1909 aa)
ENSSSAP00000064257annotation not available (161 aa)
LOC106566345methyl-CpG-binding protein 2-like. (680 aa)
LOC106604356Centromere protein F-like. (2295 aa)
ENSSSAP00000058739Bardet-Biedl syndrome 4 protein-like. (136 aa)
ENSSSAP00000056455annotation not available (204 aa)
LOC106611555Rap guanine nucleotide exchange factor 2-like isoform X5. (1653 aa)
LOC106580830Numb-like protein isoform X2. (653 aa)
LOC106572920methyl-CpG-binding protein 2-like isoform X1. (668 aa)
LOC106569598Protein kinase C iota type-like. (601 aa)
rfngbeta-1,3-N-acetylglucosaminyltransferase radical fringe. (419 aa)
LOC106608214MAGUK p55 subfamily member 5-A-like; Belongs to the MAGUK family. (708 aa)
mnat1CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (314 aa)
LOC106612624Numb-like protein isoform X1. (682 aa)
LOC106600503Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (591 aa)
arnt2Aryl hydrocarbon receptor nuclear translocator 2 isoform X3. (555 aa)
ENSSSAP00000027669Aryl hydrocarbon receptor nuclear translocator. (177 aa)
uchl5Ubiquitin carboxyl-terminal hydrolase. (331 aa)
LOC106584153Ubiquitin carboxyl-terminal hydrolase. (356 aa)
LOC106609505Cystine/glutamate transporter-like. (528 aa)
ENSSSAP00000018920Aryl-hydrocarbon receptor nuclear translocator 2. (520 aa)
ENSSSAP00000017612Deleted in primary ciliary dyskinesia homolog (mouse). (198 aa)
ENSSSAP00000017583Si:ch73-352p4.8. (449 aa)
ENSSSAP00000014757annotation not available (90 aa)
LOC106605812Aryl hydrocarbon receptor nuclear translocator isoform X4. (717 aa)
LOC106611266MAGUK p55 subfamily member 5-A-like; Belongs to the MAGUK family. (699 aa)
LOC106611270Endoribonuclease Dicer-like; Belongs to the helicase family. Dicer subfamily. (2146 aa)
cenpfCentromere protein F. (2667 aa)
RFNGBeta-1,3-N-acetylglucosaminyltransferase. (408 aa)
CDH2Cadherin-2-like; Cadherins are calcium-dependent cell adhesion proteins. (926 aa)
CCDC134Coiled-coil domain-containing protein 134-like isoform X2. (227 aa)
dpcdProtein DPCD. (203 aa)
ENSSSAP00000000686MNAT1 component of CDK activating kinase. (303 aa)
LOC106600435Aquaporin FA-CHIP-like; Belongs to the MIP/aquaporin (TC 1.A.8) family. (260 aa)
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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