STRINGSTRING
rax rax LOC106560400 LOC106560400 ENSSSAP00000002539 ENSSSAP00000002539 SIX3 SIX3 LOC100136797 LOC100136797 LOC106607884 LOC106607884 fgf3 fgf3 six3 six3 LOC106574547 LOC106574547 LOC106599328 LOC106599328 disp1 disp1 LOC106608888 LOC106608888 LOC106609474 LOC106609474 LOC106565194 LOC106565194 LOC106587135 LOC106587135 LOC106577861 LOC106577861 LOC106576285 LOC106576285 LOC106578610 LOC106578610 LOC106581764 LOC106581764 LOC106583415 LOC106583415 LOC106569233 LOC106569233 LOC100192335 LOC100192335 shh shh LOC106578932 LOC106578932 FGF3 FGF3 LOC100136798 LOC100136798 LOC106561973 LOC106561973
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
raxRetinal homeobox protein Rx. (313 aa)
LOC106560400Retinal homeobox protein Rx3-like. (301 aa)
ENSSSAP00000002539PROP paired-like homeobox 1. (206 aa)
SIX3Homeobox protein SIX3-like. (294 aa)
LOC100136797Homeobox protein. (293 aa)
LOC106607884Protein dispatched homolog 1-like isoform X1. (1555 aa)
fgf3Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (248 aa)
six3Homeobox protein SIX3. (294 aa)
LOC106574547Zinc finger protein Dzip1-like isoform X1. (913 aa)
LOC106599328Hedgehog protein; Intercellular signal essential for a variety of patterning events during development. (415 aa)
disp1Protein dispatched homolog 1. (1568 aa)
LOC106608888Homeobox protein SIX6-like isoform X1. (266 aa)
LOC106609474Achaete-scute homolog 1a-like. (194 aa)
LOC106565194Neuroendocrine convertase 1-like; Belongs to the peptidase S8 family. (776 aa)
LOC106587135Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (255 aa)
LOC106577861Homeobox protein SIX6-like isoform X1. (266 aa)
LOC106576285Achaete-scute homolog 1a. (194 aa)
LOC106578610Hedgehog protein; Intercellular signal essential for a variety of patterning events during development. (421 aa)
LOC106581764PC3-like endoprotease variant B; Belongs to the peptidase S8 family. (575 aa)
LOC106583415Neuroendocrine convertase 1-like isoform X1; Belongs to the peptidase S8 family. (779 aa)
LOC106569233Hedgehog protein; Intercellular signal essential for a variety of patterning events during development. (415 aa)
LOC100192335Prop-1-like homeobox protein. (272 aa)
shhHedgehog protein; Intercellular signal essential for a variety of patterning events during development. (421 aa)
LOC106578932Homeobox protein SIX3-like isoform X1. (265 aa)
FGF3Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (237 aa)
LOC100136798Homeobox protein. (293 aa)
LOC106561973Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (255 aa)
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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