39 items (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106582936	Inter-alpha-trypsin inhibitor heavy chain H3-like isoform X2. (910 aa)
	LOC100136559	Transforming growth factor beta; Belongs to the TGF-beta family. (381 aa)
	LOC106605656	LOW QUALITY PROTEIN: hyaluronan synthase 1-like. (558 aa)
	CEMIP	Cell migration-inducing and hyaluronan-binding protein. (1013 aa)
	LOC106578351	Hyaluronan synthase 1-like. (536 aa)
	LOC106566776	Hyaluronidase. (437 aa)
	LOC106565981	Hyaluronidase. (474 aa)
	LOC106565982	Hyaluronidase. (444 aa)
	HYAL2	Hyaluronidase. (478 aa)
	LOC106567105	Inter-alpha-trypsin inhibitor heavy chain H6-like isoform X1. (1263 aa)
	LOC106570815	Interleukin-1. (263 aa)
	ENSSSAP00000042737	annotation not available (557 aa)
	LOC106565161	Inter-alpha-trypsin inhibitor heavy chain H3-like isoform X1. (908 aa)
	has3	Hyaluronan synthase 3. (558 aa)
	LOC100136449	Interleukin-1. (260 aa)
	LOC106572619	Inter-alpha-trypsin inhibitor heavy chain H6-like isoform X1. (1233 aa)
	LOC106613337	Transforming growth factor beta; Belongs to the TGF-beta family. (384 aa)
	LOC106585357-2	Transmembrane protein 2-like. (1409 aa)
	HAS2	Hyaluronan synthase 2-like. (384 aa)
	itih5	Inter-alpha-trypsin inhibitor heavy chain H5. (1002 aa)
	LOC106583443	Inter-alpha-trypsin inhibitor heavy chain H3-like isoform X1. (929 aa)
	itih2	Inter-alpha-trypsin inhibitor heavy chain H2. (941 aa)
	LOC106583436	Hyaluronidase. (478 aa)
	tsg6	Tumor necrosis factor-inducible protein TSG-6 precursor. (265 aa)
	LOC106573695	Hyaluronan synthase 3-like isoform X2. (558 aa)
	LOC106584561	Hyaluronidase. (505 aa)
	SPAM1	Hyaluronidase. (478 aa)
	HYAL2-2	Hyaluronidase. (472 aa)
	LOC106580058	Transmembrane protein 2-like. (1408 aa)
	LOC106576126	Hyaluronidase. (1095 aa)
	LOC106585357	Transmembrane protein 2-like. (1409 aa)
	LOC106576197	Inter-alpha-trypsin inhibitor heavy chain H5-like isoform X2. (1002 aa)
	ENSSSAP00000107761	Inter-alpha-trypsin inhibitor heavy chain 2. (929 aa)
	LOC106563563	Transforming growth factor beta; Belongs to the TGF-beta family. (390 aa)
	SPAM1-2	Hyaluronidase. (464 aa)
	LOC106561029	Hyaluronidase. (512 aa)
	LOC106561028	Hyaluronidase. (492 aa)
	ITIH3	Inter-alpha-trypsin inhibitor heavy chain H3-like isoform X1. (919 aa)
	LOC106582339	Tumor necrosis factor-inducible gene 6 protein-like isoform X1. (265 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CEMIP	HYAL2	ENSSSAP00000018328	ENSSSAP00000033747	Cell migration-inducing and hyaluronan-binding protein.	Hyaluronidase.	0.500
CEMIP	HYAL2-2	ENSSSAP00000018328	ENSSSAP00000095248	Cell migration-inducing and hyaluronan-binding protein.	Hyaluronidase.	0.500
CEMIP	LOC106561029	ENSSSAP00000018328	ENSSSAP00000110362	Cell migration-inducing and hyaluronan-binding protein.	Hyaluronidase.	0.572
CEMIP	LOC106565981	ENSSSAP00000018328	ENSSSAP00000030943	Cell migration-inducing and hyaluronan-binding protein.	Hyaluronidase.	0.500
CEMIP	LOC106565982	ENSSSAP00000018328	ENSSSAP00000030960	Cell migration-inducing and hyaluronan-binding protein.	Hyaluronidase.	0.671
CEMIP	LOC106583436	ENSSSAP00000018328	ENSSSAP00000077066	Cell migration-inducing and hyaluronan-binding protein.	Hyaluronidase.	0.500
CEMIP	LOC106584561	ENSSSAP00000018328	ENSSSAP00000094469	Cell migration-inducing and hyaluronan-binding protein.	Hyaluronidase.	0.572
ENSSSAP00000042737	ENSSSAP00000107761	ENSSSAP00000042737	ENSSSAP00000107761	annotation not available	Inter-alpha-trypsin inhibitor heavy chain 2.	0.616
ENSSSAP00000042737	ITIH3	ENSSSAP00000042737	ENSSSAP00000115137	annotation not available	Inter-alpha-trypsin inhibitor heavy chain H3-like isoform X1.	0.708
ENSSSAP00000042737	LOC106567105	ENSSSAP00000042737	ENSSSAP00000034181	annotation not available	Inter-alpha-trypsin inhibitor heavy chain H6-like isoform X1.	0.623
ENSSSAP00000042737	LOC106572619	ENSSSAP00000042737	ENSSSAP00000051246	annotation not available	Inter-alpha-trypsin inhibitor heavy chain H6-like isoform X1.	0.622
ENSSSAP00000042737	LOC106576197	ENSSSAP00000042737	ENSSSAP00000106517	annotation not available	Inter-alpha-trypsin inhibitor heavy chain H5-like isoform X2.	0.618
ENSSSAP00000042737	LOC106582936	ENSSSAP00000042737	ENSSSAP00000051531	annotation not available	Inter-alpha-trypsin inhibitor heavy chain H3-like isoform X2.	0.709
ENSSSAP00000042737	itih2	ENSSSAP00000042737	ENSSSAP00000073950	annotation not available	Inter-alpha-trypsin inhibitor heavy chain H2.	0.614
ENSSSAP00000042737	itih5	ENSSSAP00000042737	ENSSSAP00000069323	annotation not available	Inter-alpha-trypsin inhibitor heavy chain H5.	0.619
ENSSSAP00000107761	ENSSSAP00000042737	ENSSSAP00000107761	ENSSSAP00000042737	Inter-alpha-trypsin inhibitor heavy chain 2.	annotation not available	0.616
ENSSSAP00000107761	LOC106565161	ENSSSAP00000107761	ENSSSAP00000044051	Inter-alpha-trypsin inhibitor heavy chain 2.	Inter-alpha-trypsin inhibitor heavy chain H3-like isoform X1.	0.610
ENSSSAP00000107761	LOC106583443	ENSSSAP00000107761	ENSSSAP00000071958	Inter-alpha-trypsin inhibitor heavy chain 2.	Inter-alpha-trypsin inhibitor heavy chain H3-like isoform X1.	0.612
HAS2	LOC106582339	ENSSSAP00000067397	ENSSSAP00000117504	Hyaluronan synthase 2-like.	Tumor necrosis factor-inducible gene 6 protein-like isoform X1.	0.567
HAS2	tsg6	ENSSSAP00000067397	ENSSSAP00000080743	Hyaluronan synthase 2-like.	Tumor necrosis factor-inducible protein TSG-6 precursor.	0.567