20 items (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106583247	Microspherule protein 1-like. (470 aa)
	ruvb1	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (456 aa)
	actr5	Actin-related protein 5; Belongs to the actin family. (606 aa)
	ino80d	INO80 complex subunit D. (996 aa)
	LOC106563415	Nuclear factor related to kappa-B-binding protein-like isoform X2. (1286 aa)
	ENSSSAP00000085107	annotation not available (172 aa)
	ruvbl2	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (511 aa)
	LOC106574865	INO80 complex subunit C-like. (215 aa)
	mcrs1	Microspherule protein 1. (476 aa)
	LOC106582458	INO80 complex subunit D-like isoform X1. (1083 aa)
	LOC106566696	Actin-related protein 5-like isoform X3. (308 aa)
	tfpt	TCF3 fusion partner. (209 aa)
	LOC106608272	DNA helicase INO80-like isoform X2. (1279 aa)
	actr8	Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize (By similarity); Belongs to the actin family. ARP8 subfamily. (659 aa)
	LOC106583210	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (456 aa)
	uchl5	Ubiquitin carboxyl-terminal hydrolase. (331 aa)
	ino80e	INO80 complex subunit E isoform X1. (239 aa)
	INO80C	INO80 complex subunit C. (139 aa)
	LOC106584153	Ubiquitin carboxyl-terminal hydrolase. (356 aa)
	LOC106603093	Nuclear factor related to kappa-B-binding protein-like isoform X1. (1269 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSSAP00000085107	INO80C	ENSSSAP00000085107	ENSSSAP00000022149	annotation not available	INO80 complex subunit C.	0.941
ENSSSAP00000085107	LOC106563415	ENSSSAP00000085107	ENSSSAP00000099425	annotation not available	Nuclear factor related to kappa-B-binding protein-like isoform X2.	0.976
ENSSSAP00000085107	LOC106566696	ENSSSAP00000085107	ENSSSAP00000008502	annotation not available	Actin-related protein 5-like isoform X3.	0.977
ENSSSAP00000085107	LOC106574865	ENSSSAP00000085107	ENSSSAP00000049380	annotation not available	INO80 complex subunit C-like.	0.941
ENSSSAP00000085107	LOC106582458	ENSSSAP00000085107	ENSSSAP00000081482	annotation not available	INO80 complex subunit D-like isoform X1.	0.950
ENSSSAP00000085107	LOC106583210	ENSSSAP00000085107	ENSSSAP00000084297	annotation not available	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.	0.893
ENSSSAP00000085107	LOC106583247	ENSSSAP00000085107	ENSSSAP00000119737	annotation not available	Microspherule protein 1-like.	0.889
ENSSSAP00000085107	LOC106584153	ENSSSAP00000085107	ENSSSAP00000020808	annotation not available	Ubiquitin carboxyl-terminal hydrolase.	0.822
ENSSSAP00000085107	LOC106603093	ENSSSAP00000085107	ENSSSAP00000010432	annotation not available	Nuclear factor related to kappa-B-binding protein-like isoform X1.	0.976
ENSSSAP00000085107	LOC106608272	ENSSSAP00000085107	ENSSSAP00000037895	annotation not available	DNA helicase INO80-like isoform X2.	0.992
ENSSSAP00000085107	actr5	ENSSSAP00000085107	ENSSSAP00000109355	annotation not available	Actin-related protein 5; Belongs to the actin family.	0.977
ENSSSAP00000085107	actr8	ENSSSAP00000085107	ENSSSAP00000029655	annotation not available	Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize (By similarity); Belongs to the actin family. ARP8 subfamily.	0.979
ENSSSAP00000085107	ino80d	ENSSSAP00000085107	ENSSSAP00000104627	annotation not available	INO80 complex subunit D.	0.950
ENSSSAP00000085107	mcrs1	ENSSSAP00000085107	ENSSSAP00000075163	annotation not available	Microspherule protein 1.	0.889
ENSSSAP00000085107	ruvb1	ENSSSAP00000085107	ENSSSAP00000038358	annotation not available	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.	0.893
ENSSSAP00000085107	ruvbl2	ENSSSAP00000085107	ENSSSAP00000044206	annotation not available	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.	0.863
ENSSSAP00000085107	tfpt	ENSSSAP00000085107	ENSSSAP00000008162	annotation not available	TCF3 fusion partner.	0.983
ENSSSAP00000085107	uchl5	ENSSSAP00000085107	ENSSSAP00000026539	annotation not available	Ubiquitin carboxyl-terminal hydrolase.	0.822
INO80C	ENSSSAP00000085107	ENSSSAP00000022149	ENSSSAP00000085107	INO80 complex subunit C.	annotation not available	0.941
INO80C	LOC106563415	ENSSSAP00000022149	ENSSSAP00000099425	INO80 complex subunit C.	Nuclear factor related to kappa-B-binding protein-like isoform X2.	0.872