STRINGSTRING
LOC106570275 LOC106570275 LOC106588472 LOC106588472 LOC106605111 LOC106605111 LOC106602420 LOC106602420 LOC106571153 LOC106571153 LOC106585979 LOC106585979 LIN28B-2 LIN28B-2 LOC106588661 LOC106588661 LOC106570038 LOC106570038 drosha drosha LOC106583270 LOC106583270 LIN28B LIN28B LOC106560426 LOC106560426 LOC100380868 LOC100380868 LOC106573969 LOC106573969 LOC106590917 LOC106590917 LOC106584061 LOC106584061 LOC106607557 LOC106607557 adar adar tarbp2 tarbp2 LOC106611270 LOC106611270
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC106570275Protein lin-28 homolog A-like isoform X2. (202 aa)
LOC106588472Protein argonaute-4; Required for RNA-mediated gene silencing (RNAi). Binds to short RNAs such as microRNAs (miRNAs) and represses the translation of mRNAs which are complementary to them. Lacks endonuclease activity and does not appear to cleave target mRNAs; Belongs to the argonaute family. Ago subfamily. (891 aa)
LOC106605111Protein lin-28 homolog A-like isoform X1. (202 aa)
LOC106602420Endoribonuclease Dicer-like isoform X1; Belongs to the helicase family. Dicer subfamily. (1995 aa)
LOC106571153Protein lin-28 homolog B-like isoform X3. (231 aa)
LOC106585979LOW QUALITY PROTEIN: terminal uridylyltransferase 7-like. (1079 aa)
LIN28B-2Protein lin-28 homolog A-like isoform X1. (300 aa)
LOC106588661Protein lin-28 homolog A-like isoform X3. (200 aa)
LOC106570038Protein argonaute-4; Required for RNA-mediated gene silencing (RNAi). Binds to short RNAs such as microRNAs (miRNAs) and represses the translation of mRNAs which are complementary to them. Lacks endonuclease activity and does not appear to cleave target mRNAs; Belongs to the argonaute family. Ago subfamily. (887 aa)
droshaRibonuclease 3 isoform X1. (1437 aa)
LOC106583270Protein lin-28 homolog A-like isoform X1. (202 aa)
LIN28BProtein lin-28 homolog A-like isoform X1. (285 aa)
LOC106560426Terminal uridylyltransferase 4-like isoform X2. (1559 aa)
LOC100380868Terminal uridylyltransferase 7. (897 aa)
LOC106573969Double-stranded RNA-specific adenosine deaminase-like. (696 aa)
LOC106590917Terminal uridylyltransferase 7-like. (217 aa)
LOC106584061Terminal uridylyltransferase 4-like isoform X2. (1565 aa)
LOC106607557Protein lin-28 homolog A-like isoform X1. (271 aa)
adarDouble-stranded RNA-specific adenosine deaminase. (1358 aa)
tarbp2RISC-loading complex subunit TARBP2; Required for formation of the RNA induced silencing complex (RISC). Component of the RISC loading complex (RLC), also known as the micro-RNA (miRNA) loading complex (miRLC), which is composed of DICER1, AGO2 and TARBP2. Within the RLC/miRLC, DICER1 and TARBP2 are required to process precursor miRNAs (pre-miRNAs) to mature miRNAs and then load them onto AGO2. AGO2 bound to the mature miRNA constitutes the minimal RISC and may subsequently dissociate from DICER1 and TARBP2. May also play a role in the production of short interfering RNAs (siRNAs) from [...] (347 aa)
LOC106611270Endoribonuclease Dicer-like; Belongs to the helicase family. Dicer subfamily. (2146 aa)
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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