STRINGSTRING
LOC106604510 LOC106604510 LOC100136559 LOC100136559 LOC106593938 LOC106593938 LOC106564086 LOC106564086 lrrk2 lrrk2 sirt1 sirt1 LOC106599159 LOC106599159 LOC106613337 LOC106613337 LOC106589477 LOC106589477 sdr16c5 sdr16c5 LOC106568881 LOC106568881 pink1 pink1 LOC106612810 LOC106612810 ENSSSAP00000106634 ENSSSAP00000106634 LOC106571445 LOC106571445 LOC106563563 LOC106563563 LOC106580503 LOC106580503 LOC106585113 LOC106585113
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC106604510NAD-dependent protein deacetylase sirtuin-1-like isoform X2. (713 aa)
LOC100136559Transforming growth factor beta; Belongs to the TGF-beta family. (381 aa)
LOC106593938Glycine-rich cell wall structural protein 1.0-like isoform X1. (538 aa)
LOC106564086A-kinase anchor protein 8-like isoform X1; Belongs to the AKAP95 family. (459 aa)
lrrk2Leucine-rich repeat serine/threonine-protein kinase 2 isoform X2. (2564 aa)
sirt1NAD-dependent protein deacetylase sirtuin-1. (783 aa)
LOC106599159Epidermal retinol dehydrogenase 2-like isoform X2; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (324 aa)
LOC106613337Transforming growth factor beta; Belongs to the TGF-beta family. (384 aa)
LOC106589477SAP30-binding protein-like isoform X3. (307 aa)
sdr16c5Epidermal retinol dehydrogenase 2; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (305 aa)
LOC106568881Epidermal retinol dehydrogenase 2-like; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (306 aa)
pink1Serine/threonine-protein kinase PINK1, mitochondrial. (576 aa)
LOC106612810Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family. (603 aa)
ENSSSAP00000106634SAP30 binding protein. (258 aa)
LOC106571445Epidermal retinol dehydrogenase 2-like; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (346 aa)
LOC106563563Transforming growth factor beta; Belongs to the TGF-beta family. (390 aa)
LOC106580503Zinc finger protein 703-like. (579 aa)
LOC106585113Zinc finger protein 703-like. (584 aa)
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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