31 items (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106603888	Interleukin-12 subunit beta; Belongs to the type I cytokine receptor family. Type 3 subfamily. (323 aa)
	LOC106613023	Cell adhesion molecule 1-like isoform X2. (421 aa)
	LOC106579964	P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel. Belongs to the P2X receptor family. (569 aa)
	cd226	CD226 antigen precursor. (367 aa)
	LOC106585461	P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel. Belongs to the P2X receptor family. (610 aa)
	LOC106567437	Interleukin-12 subunit beta; Belongs to the type I cytokine receptor family. Type 3 subfamily. (320 aa)
	ENSSSAP00000086771	annotation not available (276 aa)
	LOC106604286	Interleukin-12 subunit beta; Belongs to the type I cytokine receptor family. Type 3 subfamily. (351 aa)
	crtam	Cytotoxic and regulatory T-cell molecule. (457 aa)
	ptprc	Receptor-type tyrosine-protein phosphatase C isoform X1. (1412 aa)
	LOC106581151	Cell adhesion molecule 1-like isoform X1. (421 aa)
	LOC106577762	Perforin-1-like. (606 aa)
	LOC106567730	Cell adhesion molecule 1-like isoform X3. (418 aa)
	LOC106604676	Signal-transducing adaptor protein 1-like. (341 aa)
	LOC106605663	TYRO protein tyrosine kinase-binding protein-like. (104 aa)
	LOC106567642	Cytotoxic and regulatory T-cell molecule-like isoform X2. (426 aa)
	ENSSSAP00000039604	annotation not available (359 aa)
	LOC106561969	FAS-associated death domain protein-like. (195 aa)
	LOC106587129	FAS-associated death domain protein-like. (221 aa)
	LOC106606884	Perforin-1-like. (589 aa)
	LOC106612126	Interleukin-12 subunit beta; Belongs to the type I cytokine receptor family. Type 3 subfamily. (389 aa)
	LOC106577768	TYRO protein tyrosine kinase-binding protein-like. (155 aa)
	LOC106603642	Cell adhesion molecule 1-like isoform X1. (443 aa)
	LOC106567801	SH2 domain-containing protein 1A-like. (116 aa)
	LOC106608811	Perforin-1-like isoform X1. (606 aa)
	LOC106605731	Uncharacterized LOC106605731. (377 aa)
	sh21a	SH2 domain-containing protein 1A. (138 aa)
	ENSSSAP00000003110	annotation not available (214 aa)
	LOC106611793	Signal-transducing adaptor protein 1-like. (391 aa)
	LOC106584517	H-2 class II histocompatibility antigen, A-U alpha chain-like. (279 aa)
	ENSSSAP00000095957	annotation not available (250 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC106561969	LOC106587129	ENSSSAP00000115282	ENSSSAP00000037844	FAS-associated death domain protein-like.	FAS-associated death domain protein-like.	0.900
LOC106567642	LOC106567730	ENSSSAP00000048954	ENSSSAP00000070614	Cytotoxic and regulatory T-cell molecule-like isoform X2.	Cell adhesion molecule 1-like isoform X3.	0.409
LOC106567642	LOC106581151	ENSSSAP00000048954	ENSSSAP00000079245	Cytotoxic and regulatory T-cell molecule-like isoform X2.	Cell adhesion molecule 1-like isoform X1.	0.409
LOC106567642	LOC106603642	ENSSSAP00000048954	ENSSSAP00000024589	Cytotoxic and regulatory T-cell molecule-like isoform X2.	Cell adhesion molecule 1-like isoform X1.	0.409
LOC106567642	LOC106613023	ENSSSAP00000048954	ENSSSAP00000100727	Cytotoxic and regulatory T-cell molecule-like isoform X2.	Cell adhesion molecule 1-like isoform X2.	0.409
LOC106567642	cd226	ENSSSAP00000048954	ENSSSAP00000114469	Cytotoxic and regulatory T-cell molecule-like isoform X2.	CD226 antigen precursor.	0.433
LOC106567730	LOC106567642	ENSSSAP00000070614	ENSSSAP00000048954	Cell adhesion molecule 1-like isoform X3.	Cytotoxic and regulatory T-cell molecule-like isoform X2.	0.409
LOC106567730	LOC106581151	ENSSSAP00000070614	ENSSSAP00000079245	Cell adhesion molecule 1-like isoform X3.	Cell adhesion molecule 1-like isoform X1.	0.901
LOC106567730	LOC106603642	ENSSSAP00000070614	ENSSSAP00000024589	Cell adhesion molecule 1-like isoform X3.	Cell adhesion molecule 1-like isoform X1.	0.900
LOC106567730	LOC106612126	ENSSSAP00000070614	ENSSSAP00000034690	Cell adhesion molecule 1-like isoform X3.	Interleukin-12 subunit beta; Belongs to the type I cytokine receptor family. Type 3 subfamily.	0.611
LOC106567730	crtam	ENSSSAP00000070614	ENSSSAP00000085194	Cell adhesion molecule 1-like isoform X3.	Cytotoxic and regulatory T-cell molecule.	0.409
LOC106567801	ptprc	ENSSSAP00000019409	ENSSSAP00000079402	SH2 domain-containing protein 1A-like.	Receptor-type tyrosine-protein phosphatase C isoform X1.	0.438
LOC106577762	LOC106605731	ENSSSAP00000076679	ENSSSAP00000007927	Perforin-1-like.	Uncharacterized LOC106605731.	0.527
LOC106577762	cd226	ENSSSAP00000076679	ENSSSAP00000114469	Perforin-1-like.	CD226 antigen precursor.	0.447
LOC106577768	cd226	ENSSSAP00000030157	ENSSSAP00000114469	TYRO protein tyrosine kinase-binding protein-like.	CD226 antigen precursor.	0.410
LOC106577768	ptprc	ENSSSAP00000030157	ENSSSAP00000079402	TYRO protein tyrosine kinase-binding protein-like.	Receptor-type tyrosine-protein phosphatase C isoform X1.	0.567
LOC106581151	LOC106567642	ENSSSAP00000079245	ENSSSAP00000048954	Cell adhesion molecule 1-like isoform X1.	Cytotoxic and regulatory T-cell molecule-like isoform X2.	0.409
LOC106581151	LOC106567730	ENSSSAP00000079245	ENSSSAP00000070614	Cell adhesion molecule 1-like isoform X1.	Cell adhesion molecule 1-like isoform X3.	0.901
LOC106581151	LOC106603642	ENSSSAP00000079245	ENSSSAP00000024589	Cell adhesion molecule 1-like isoform X1.	Cell adhesion molecule 1-like isoform X1.	0.901
LOC106581151	LOC106612126	ENSSSAP00000079245	ENSSSAP00000034690	Cell adhesion molecule 1-like isoform X1.	Interleukin-12 subunit beta; Belongs to the type I cytokine receptor family. Type 3 subfamily.	0.611