16 items (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	eme1	Crossover junction endonuclease EME1 isoform X1. (564 aa)
	tipin	TIMELESS-interacting protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family. (301 aa)
	mus81	Crossover junction endonuclease MUS81. (575 aa)
	LOC106585648	Serine/threonine-protein kinase Chk2-like isoform X2. (546 aa)
	rad9a	Cell cycle checkpoint control protein; Belongs to the rad9 family. (393 aa)
	MRE11	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (474 aa)
	LOC106579187	Probable crossover junction endonuclease EME2. (256 aa)
	LOC106580118	Serine/threonine-protein kinase Chk2-like isoform X1. (508 aa)
	Mre11	MRE11 homolog, double strand break repair nuclease. (452 aa)
	ENSSSAP00000080183	annotation not available (109 aa)
	xpc	DNA repair protein complementing XP-C cells. (905 aa)
	LOC106581758	Cell division cycle-associated protein 7-like isoform X2. (399 aa)
	msh2	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (928 aa)
	rad9b	Cell cycle checkpoint control protein RAD9B. (301 aa)
	hus1	Checkpoint protein; Belongs to the HUS1 family. (361 aa)
	fancd2	Fanconi anemia group D2 protein. (1490 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSSAP00000080183	LOC106580118	ENSSSAP00000080183	ENSSSAP00000073753	annotation not available	Serine/threonine-protein kinase Chk2-like isoform X1.	0.732
ENSSSAP00000080183	LOC106585648	ENSSSAP00000080183	ENSSSAP00000055524	annotation not available	Serine/threonine-protein kinase Chk2-like isoform X2.	0.732
ENSSSAP00000080183	MRE11	ENSSSAP00000080183	ENSSSAP00000067517	annotation not available	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.	0.732
ENSSSAP00000080183	Mre11	ENSSSAP00000080183	ENSSSAP00000074445	annotation not available	MRE11 homolog, double strand break repair nuclease.	0.732
ENSSSAP00000080183	eme1	ENSSSAP00000080183	ENSSSAP00000000148	annotation not available	Crossover junction endonuclease EME1 isoform X1.	0.427
ENSSSAP00000080183	fancd2	ENSSSAP00000080183	ENSSSAP00000118850	annotation not available	Fanconi anemia group D2 protein.	0.510
ENSSSAP00000080183	hus1	ENSSSAP00000080183	ENSSSAP00000116698	annotation not available	Checkpoint protein; Belongs to the HUS1 family.	0.989
ENSSSAP00000080183	msh2	ENSSSAP00000080183	ENSSSAP00000099762	annotation not available	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	0.441
ENSSSAP00000080183	mus81	ENSSSAP00000080183	ENSSSAP00000052538	annotation not available	Crossover junction endonuclease MUS81.	0.610
ENSSSAP00000080183	tipin	ENSSSAP00000080183	ENSSSAP00000038207	annotation not available	TIMELESS-interacting protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family.	0.807
ENSSSAP00000080183	xpc	ENSSSAP00000080183	ENSSSAP00000081408	annotation not available	DNA repair protein complementing XP-C cells.	0.408
LOC106579187	MRE11	ENSSSAP00000068065	ENSSSAP00000067517	Probable crossover junction endonuclease EME2.	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.	0.569
LOC106579187	Mre11	ENSSSAP00000068065	ENSSSAP00000074445	Probable crossover junction endonuclease EME2.	MRE11 homolog, double strand break repair nuclease.	0.569
LOC106579187	eme1	ENSSSAP00000068065	ENSSSAP00000000148	Probable crossover junction endonuclease EME2.	Crossover junction endonuclease EME1 isoform X1.	0.842
LOC106579187	fancd2	ENSSSAP00000068065	ENSSSAP00000118850	Probable crossover junction endonuclease EME2.	Fanconi anemia group D2 protein.	0.564
LOC106579187	mus81	ENSSSAP00000068065	ENSSSAP00000052538	Probable crossover junction endonuclease EME2.	Crossover junction endonuclease MUS81.	0.997
LOC106580118	ENSSSAP00000080183	ENSSSAP00000073753	ENSSSAP00000080183	Serine/threonine-protein kinase Chk2-like isoform X1.	annotation not available	0.732
LOC106580118	LOC106581758	ENSSSAP00000073753	ENSSSAP00000092269	Serine/threonine-protein kinase Chk2-like isoform X1.	Cell division cycle-associated protein 7-like isoform X2.	0.720
LOC106580118	LOC106585648	ENSSSAP00000073753	ENSSSAP00000055524	Serine/threonine-protein kinase Chk2-like isoform X1.	Serine/threonine-protein kinase Chk2-like isoform X2.	0.900
LOC106580118	MRE11	ENSSSAP00000073753	ENSSSAP00000067517	Serine/threonine-protein kinase Chk2-like isoform X1.	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.	0.835