68 items (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSSAP00000000810	annotation not available (258 aa)
	LOC106589789	Structure-specific endonuclease subunit SLX4-like isoform X1. (1073 aa)
	LOC106604099	Transcriptional regulator ATRX-like. (1206 aa)
	ENSSSAP00000004424	annotation not available (113 aa)
	tfpt	TCF3 fusion partner. (209 aa)
	LOC106564723	Dual specificity mitogen-activated protein kinase kinase 7-like isoform X2. (441 aa)
	LOC106567810	Transcriptional regulator ATRX-like. (1697 aa)
	ENSSSAP00000009947	annotation not available (57 aa)
	LOC106603093	Nuclear factor related to kappa-B-binding protein-like isoform X1. (1269 aa)
	LOC106563476	Poly [ADP-ribose] polymerase. (1338 aa)
	LOC106584153	Ubiquitin carboxyl-terminal hydrolase. (356 aa)
	ENSSSAP00000021120	annotation not available (57 aa)
	ENSSSAP00000022294	annotation not available (57 aa)
	ino80e	INO80 complex subunit E isoform X1. (239 aa)
	uchl5	Ubiquitin carboxyl-terminal hydrolase. (331 aa)
	naf1	H/ACA ribonucleoprotein complex non-core subunit NAF1 isoform X1. (372 aa)
	ENSSSAP00000029663	annotation not available (85 aa)
	LOC106577450	Structure-specific endonuclease subunit SLX1; Catalytic subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. (246 aa)
	LOC106612627	Bifunctional polynucleotide phosphatase/kinase-like. (619 aa)
	LOC106612325	Transcriptional regulator ATRX-like. (2621 aa)
	tcpg	T-complex protein 1 subunit gamma. (540 aa)
	LOC106608272	DNA helicase INO80-like isoform X2. (1279 aa)
	LOC106603335	Transcriptional regulator ATRX-like. (1643 aa)
	LOC106571043	Homeobox-containing protein 1-like isoform X2. (588 aa)
	atm	Non-specific serine/threonine protein kinase. (3172 aa)
	ENSSSAP00000048205	annotation not available (73 aa)
	LOC106580348	T-complex protein 1 subunit gamma-like. (583 aa)
	tcpb	T-complex protein 1 subunit beta. (535 aa)
	LOC106607573	Serine/threonine-protein kinase Nek2-like. (446 aa)
	ENSSSAP00000061817	Mitogen-activated protein kinase kinase kinase 4-like. (543 aa)
	ENSSSAP00000062239	annotation not available (1132 aa)
	LOC106593264	T-complex protein 1 subunit beta-like. (500 aa)
	ENSSSAP00000067250	annotation not available (57 aa)
	LOC106580453	Poly [ADP-ribose] polymerase. (1260 aa)
	LOC106563393	H/ACA ribonucleoprotein complex subunit 4-like. (500 aa)
	atr	Serine/threonine-protein kinase ATR; Belongs to the PI3/PI4-kinase family. (2476 aa)
	mcrs1	Microspherule protein 1. (476 aa)
	LOC106590610	T-complex protein 1 subunit epsilon-like. (541 aa)
	FBX4	F-box only protein 4. (408 aa)
	LOC106587435	Dual specificity mitogen-activated protein kinase kinase 7-like isoform X1. (440 aa)
	LOC100194668	T-complex protein 1 subunit gamma. (540 aa)
	ENSSSAP00000079966	annotation not available (1325 aa)
	dhx36	ATP-dependent RNA helicase DHX36. (780 aa)
	LOC106582458	INO80 complex subunit D-like isoform X1. (1083 aa)
	tnks2	Poly [ADP-ribose] polymerase. (1232 aa)
	ENSSSAP00000085107	annotation not available (172 aa)
	glmp	Salmo salar CA085 protein (glmp), mRNA. (536 aa)
	ENSSSAP00000091231	annotation not available (74 aa)
	LOC106585864	MAP kinase-activated protein kinase 5-like. (333 aa)
	pot1	Protection of telomeres protein 1 isoform X1. (838 aa)
	LOC106588707	Serine/threonine-protein phosphatase 1 regulatory subunit 10-like isoform X2. (842 aa)
	LOC106570322	Serine/threonine-protein phosphatase 1 regulatory subunit 10-like isoform X2. (842 aa)
	LOC106563415	Nuclear factor related to kappa-B-binding protein-like isoform X2. (1286 aa)
	LOC106571199	Serine/threonine-protein kinase Nek2-like. (446 aa)
	mapkapk5	MAP kinase-activated protein kinase 5 isoform X2. (513 aa)
	rad50	DNA repair protein RAD50. (1316 aa)
	LOC106589750	Mitogen-activated protein kinase kinase kinase 4-like isoform X1. (1725 aa)
	ercc1	DNA excision repair protein ERCC-1. (383 aa)
	ENSSSAP00000103411	annotation not available (112 aa)
	ino80d	INO80 complex subunit D. (996 aa)
	ENSSSAP00000105257	Serine-protein kinase ATM-like. (111 aa)
	LOC106568241	Poly [ADP-ribose] polymerase. (1253 aa)
	DKC1	H/ACA ribonucleoprotein complex subunit 4. (534 aa)
	tcpe	T-complex protein 1 subunit epsilon. (541 aa)
	ENSSSAP00000114968	annotation not available (273 aa)
	sirt6	NAD-dependent protein deacetylase sirtuin-6 isoform X1. (383 aa)
	LOC106583247	Microspherule protein 1-like. (470 aa)
	piwil2	Poly [ADP-ribose] polymerase. (1274 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DKC1	LOC106563393	ENSSSAP00000109752	ENSSSAP00000072902	H/ACA ribonucleoprotein complex subunit 4.	H/ACA ribonucleoprotein complex subunit 4-like.	0.900
DKC1	naf1	ENSSSAP00000109752	ENSSSAP00000029613	H/ACA ribonucleoprotein complex subunit 4.	H/ACA ribonucleoprotein complex non-core subunit NAF1 isoform X1.	0.989
DKC1	pot1	ENSSSAP00000109752	ENSSSAP00000094520	H/ACA ribonucleoprotein complex subunit 4.	Protection of telomeres protein 1 isoform X1.	0.800
ENSSSAP00000000810	ENSSSAP00000079966	ENSSSAP00000000810	ENSSSAP00000079966	annotation not available	annotation not available	0.969
ENSSSAP00000000810	ENSSSAP00000105257	ENSSSAP00000000810	ENSSSAP00000105257	annotation not available	Serine-protein kinase ATM-like.	0.734
ENSSSAP00000000810	LOC106577450	ENSSSAP00000000810	ENSSSAP00000032915	annotation not available	Structure-specific endonuclease subunit SLX1; Catalytic subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA.	0.971
ENSSSAP00000000810	atm	ENSSSAP00000000810	ENSSSAP00000045237	annotation not available	Non-specific serine/threonine protein kinase.	0.734
ENSSSAP00000000810	ercc1	ENSSSAP00000000810	ENSSSAP00000102627	annotation not available	DNA excision repair protein ERCC-1.	0.985
ENSSSAP00000000810	rad50	ENSSSAP00000000810	ENSSSAP00000101925	annotation not available	DNA repair protein RAD50.	0.679
ENSSSAP00000009947	LOC100194668	ENSSSAP00000009947	ENSSSAP00000077537	annotation not available	T-complex protein 1 subunit gamma.	0.949
ENSSSAP00000009947	LOC106580348	ENSSSAP00000009947	ENSSSAP00000051814	annotation not available	T-complex protein 1 subunit gamma-like.	0.949
ENSSSAP00000009947	LOC106590610	ENSSSAP00000009947	ENSSSAP00000075204	annotation not available	T-complex protein 1 subunit epsilon-like.	0.991
ENSSSAP00000009947	glmp	ENSSSAP00000009947	ENSSSAP00000089218	annotation not available	Salmo salar CA085 protein (glmp), mRNA.	0.949
ENSSSAP00000009947	tcpe	ENSSSAP00000009947	ENSSSAP00000113020	annotation not available	T-complex protein 1 subunit epsilon.	0.991
ENSSSAP00000009947	tcpg	ENSSSAP00000009947	ENSSSAP00000037105	annotation not available	T-complex protein 1 subunit gamma.	0.949
ENSSSAP00000021120	LOC100194668	ENSSSAP00000021120	ENSSSAP00000077537	annotation not available	T-complex protein 1 subunit gamma.	0.949
ENSSSAP00000021120	LOC106580348	ENSSSAP00000021120	ENSSSAP00000051814	annotation not available	T-complex protein 1 subunit gamma-like.	0.949
ENSSSAP00000021120	LOC106590610	ENSSSAP00000021120	ENSSSAP00000075204	annotation not available	T-complex protein 1 subunit epsilon-like.	0.991
ENSSSAP00000021120	glmp	ENSSSAP00000021120	ENSSSAP00000089218	annotation not available	Salmo salar CA085 protein (glmp), mRNA.	0.949
ENSSSAP00000021120	tcpe	ENSSSAP00000021120	ENSSSAP00000113020	annotation not available	T-complex protein 1 subunit epsilon.	0.991