STRINGSTRING
LOC106573166 LOC106573166 rb1 rb1 ENSSSAP00000000686 ENSSSAP00000000686 LOC106601005 LOC106601005 ENSSSAP00000012739 ENSSSAP00000012739 ercc3 ercc3 Ercc3 Ercc3 gtf2h5 gtf2h5 ccnh ccnh Ccnt1 Ccnt1 ENSSSAP00000029810 ENSSSAP00000029810 LOC106571114 LOC106571114 LOC100196672 LOC100196672 mnat1 mnat1 gtf2h1 gtf2h1 gtf2h4 gtf2h4 ccnk ccnk LOC106607271 LOC106607271 ENSSSAP00000043908 ENSSSAP00000043908 LOC106586308 LOC106586308 LOC106572598 LOC106572598 ccnt2 ccnt2 ercc2 ercc2 ENSSSAP00000074515 ENSSSAP00000074515 LOC106584761 LOC106584761 LOC106590203 LOC106590203 ENSSSAP00000095840 ENSSSAP00000095840 LOC106578728 LOC106578728 gtf2h3 gtf2h3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC106573166cyclin-T2-like isoform X2; Belongs to the cyclin family. (611 aa)
rb1Retinoblastoma-associated protein. (910 aa)
ENSSSAP00000000686MNAT1 component of CDK activating kinase. (303 aa)
LOC106601005Cyclin-dependent kinase 12-like isoform X2. (1403 aa)
ENSSSAP00000012739annotation not available (547 aa)
ercc3TFIIH basal transcription factor complex helicase XPB subunit. (759 aa)
Ercc3ERCC excision repair 3, TFIIH core complex helicase subunit. (100 aa)
gtf2h5General transcription factor IIH subunit 5. (71 aa)
ccnhcyclin-H isoform X1; Belongs to the cyclin family. (324 aa)
Ccnt1Cyclin T1. (486 aa)
ENSSSAP00000029810annotation not available (198 aa)
LOC106571114cyclin-K-like; Belongs to the cyclin family. (559 aa)
LOC100196672General transcription factor IIH subunit. (393 aa)
mnat1CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (314 aa)
gtf2h1General transcription factor IIH subunit 1. (588 aa)
gtf2h4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (462 aa)
ccnkcyclin-K isoform X1; Belongs to the cyclin family. (565 aa)
LOC106607271Cyclin-dependent kinase 12-like. (1410 aa)
ENSSSAP00000043908annotation not available (361 aa)
LOC106586308cyclin-T2-like; Belongs to the cyclin family. (704 aa)
LOC106572598cyclin-T1-like isoform X2; Belongs to the cyclin family. (668 aa)
ccnt2cyclin-T2 isoform X1; Belongs to the cyclin family. (690 aa)
ercc2TFIIH basal transcription factor complex helicase subunit. (849 aa)
ENSSSAP00000074515Excision repair cross-complementation group 2. (324 aa)
LOC106584761General transcription factor IIH subunit 1-like. (599 aa)
LOC106590203Cyclin-dependent kinase 13-like. (1395 aa)
ENSSSAP00000095840Cyclin H. (183 aa)
LOC106578728Cyclin-dependent kinase 13-like. (1395 aa)
gtf2h3General transcription factor IIH subunit 3. (303 aa)
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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