35 items (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106602324	Polycystin-2-like isoform X1. (918 aa)
	LOC106600550	La-related protein 6-like isoform X1. (489 aa)
	LOC106590795	Transforming growth factor beta; Belongs to the TGF-beta family. (409 aa)
	LOC100136559	Transforming growth factor beta; Belongs to the TGF-beta family. (381 aa)
	LOC106611378	EMILIN-1-like. (1216 aa)
	LOC106602263	Polycystin-2-like isoform X1. (823 aa)
	LOC106586832	Regulator of cell cycle RGCC-like. (145 aa)
	LOC106571668	La-related protein 6-like. (345 aa)
	LOC106567902	Alpha-2-antiplasmin-like isoform X4; Belongs to the serpin family. (437 aa)
	LOC106587117	Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family. (622 aa)
	LOC106562346	La-related protein 6-like. (682 aa)
	rgcc	Regulator of cell cycle. (209 aa)
	LOC106573560	La-related protein 6-like. (508 aa)
	LOC106571081	EMILIN-1-like isoform X1. (900 aa)
	LOC106571074	Transforming growth factor beta-3-like. (396 aa)
	LOC106613974	SUN domain-containing ossification factor-like isoform X1. (1300 aa)
	LOC106565918	ERBB receptor feedback inhibitor 1-like isoform X1. (460 aa)
	tgfb3	Transforming growth factor beta 3. (419 aa)
	LOC106584226	SUN domain-containing ossification factor-like. (1389 aa)
	LOC106603572	Alpha-2-antiplasmin-like; Belongs to the serpin family. (471 aa)
	LOC106613337	Transforming growth factor beta; Belongs to the TGF-beta family. (384 aa)
	LOC106608297	Transforming growth factor beta; Belongs to the TGF-beta family. (415 aa)
	LOC106612935	Alpha-2-antiplasmin-like isoform X3; Belongs to the serpin family. (496 aa)
	LOC106600415	SUN domain-containing ossification factor-like isoform X2. (1377 aa)
	LOC106610283	Polycystin-2-like isoform X1. (918 aa)
	errfi	ERBB receptor feedback inhibitor 1 isoform X1. (495 aa)
	LOC106569417	SUN domain-containing ossification factor-like isoform X3. (1361 aa)
	ucn	Urocortin. (165 aa)
	LOC106571442	UI-like. (199 aa)
	LOC106587560	La-related protein 6-like. (677 aa)
	LOC106603011	EMILIN-1-like isoform X1. (1199 aa)
	F2R	Proteinase-activated receptor 1-like. (458 aa)
	LOC106563563	Transforming growth factor beta; Belongs to the TGF-beta family. (390 aa)
	F2R-2	Proteinase-activated receptor 1. (497 aa)
	LOC106561958	Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family. (622 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F2R	F2R-2	ENSSSAP00000108863	ENSSSAP00000111443	Proteinase-activated receptor 1-like.	Proteinase-activated receptor 1.	0.901
F2R	LOC106561958	ENSSSAP00000108863	ENSSSAP00000115025	Proteinase-activated receptor 1-like.	Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.	0.998
F2R	LOC106587117	ENSSSAP00000108863	ENSSSAP00000034781	Proteinase-activated receptor 1-like.	Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.	0.998
F2R-2	F2R	ENSSSAP00000111443	ENSSSAP00000108863	Proteinase-activated receptor 1.	Proteinase-activated receptor 1-like.	0.901
F2R-2	LOC106561958	ENSSSAP00000111443	ENSSSAP00000115025	Proteinase-activated receptor 1.	Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.	0.998
F2R-2	LOC106587117	ENSSSAP00000111443	ENSSSAP00000034781	Proteinase-activated receptor 1.	Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.	0.998
LOC100136559	LOC106563563	ENSSSAP00000004983	ENSSSAP00000109831	Transforming growth factor beta; Belongs to the TGF-beta family.	Transforming growth factor beta; Belongs to the TGF-beta family.	0.900
LOC100136559	LOC106571074	ENSSSAP00000004983	ENSSSAP00000079210	Transforming growth factor beta; Belongs to the TGF-beta family.	Transforming growth factor beta-3-like.	0.611
LOC100136559	LOC106590795	ENSSSAP00000004983	ENSSSAP00000004560	Transforming growth factor beta; Belongs to the TGF-beta family.	Transforming growth factor beta; Belongs to the TGF-beta family.	0.623
LOC100136559	LOC106608297	ENSSSAP00000004983	ENSSSAP00000051064	Transforming growth factor beta; Belongs to the TGF-beta family.	Transforming growth factor beta; Belongs to the TGF-beta family.	0.611
LOC100136559	LOC106613337	ENSSSAP00000004983	ENSSSAP00000053777	Transforming growth factor beta; Belongs to the TGF-beta family.	Transforming growth factor beta; Belongs to the TGF-beta family.	0.901
LOC100136559	tgfb3	ENSSSAP00000004983	ENSSSAP00000059201	Transforming growth factor beta; Belongs to the TGF-beta family.	Transforming growth factor beta 3.	0.632
LOC106561958	F2R	ENSSSAP00000115025	ENSSSAP00000108863	Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.	Proteinase-activated receptor 1-like.	0.998
LOC106561958	F2R-2	ENSSSAP00000115025	ENSSSAP00000111443	Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.	Proteinase-activated receptor 1.	0.998
LOC106561958	LOC106567902	ENSSSAP00000115025	ENSSSAP00000029769	Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.	Alpha-2-antiplasmin-like isoform X4; Belongs to the serpin family.	0.766
LOC106561958	LOC106587117	ENSSSAP00000115025	ENSSSAP00000034781	Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.	Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.	0.900
LOC106561958	LOC106603572	ENSSSAP00000115025	ENSSSAP00000055970	Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.	Alpha-2-antiplasmin-like; Belongs to the serpin family.	0.766
LOC106561958	LOC106612935	ENSSSAP00000115025	ENSSSAP00000050191	Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.	Alpha-2-antiplasmin-like isoform X3; Belongs to the serpin family.	0.766
LOC106563563	LOC100136559	ENSSSAP00000109831	ENSSSAP00000004983	Transforming growth factor beta; Belongs to the TGF-beta family.	Transforming growth factor beta; Belongs to the TGF-beta family.	0.900
LOC106563563	LOC106571074	ENSSSAP00000109831	ENSSSAP00000079210	Transforming growth factor beta; Belongs to the TGF-beta family.	Transforming growth factor beta-3-like.	0.611