STRINGSTRING
LOC106567237 LOC106567237 kdm1b kdm1b LOC106572432 LOC106572432 LOC106571660 LOC106571660 LOC106610674 LOC106610674 LOC106572475 LOC106572475 LOC106608197 LOC106608197 riox2 riox2 LOC106562352 LOC106562352 LOC106609087 LOC106609087 LOC106596596 LOC106596596 LOC106565423 LOC106565423 nelfd nelfd LOC106567205 LOC106567205 kdm5a kdm5a ENSSSAP00000009638 ENSSSAP00000009638
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC106567237Lysine-specific demethylase 5C-like isoform X1. (1780 aa)
kdm1bLysine-specific histone demethylase 1B isoform X1. (856 aa)
LOC106572432Lysine-specific demethylase 5C-like isoform X1. (1605 aa)
LOC106571660Bifunctional lysine-specific demethylase and histidyl-hydroxylase; Oxygenase that can act as both a histone lysine demethylase and a ribosomal histidine hydroxylase. (811 aa)
LOC106610674Lysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. (828 aa)
LOC106572475Lysine-specific demethylase 5B-B-like isoform X1. (1544 aa)
LOC106608197Bifunctional lysine-specific demethylase and histidyl-hydroxylase; Oxygenase that can act as both a histone lysine demethylase and a ribosomal histidine hydroxylase. (546 aa)
riox2Bifunctional lysine-specific demethylase and histidyl-hydroxylase; Oxygenase that can act as both a histone lysine demethylase and a ribosomal histidine hydroxylase. (483 aa)
LOC106562352Lysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. (866 aa)
LOC106609087Lysine-specific demethylase 5A-like. (914 aa)
LOC106596596Lysine-specific demethylase 5A-like. (378 aa)
LOC106565423Lysine-specific demethylase 5B-B-like. (1498 aa)
nelfdLysine-specific demethylase 5B-B-like isoform X1. (1567 aa)
LOC106567205Lysine-specific demethylase 5B-B-like isoform X3. (1523 aa)
kdm5aLysine-specific demethylase 5A isoform X5. (1636 aa)
ENSSSAP00000009638Lysine-specific demethylase 5A-like. (170 aa)
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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