STRINGSTRING
ZC3H10 ZC3H10 LOC106578158 LOC106578158 LOC106590917 LOC106590917 LOC106601915 LOC106601915 LOC106568923 LOC106568923 z3h7a z3h7a LOC106606429-2 LOC106606429-2 LOC106606429 LOC106606429 PNPT1 PNPT1 LOC106574070 LOC106574070 LOC106584061 LOC106584061 zc3h12a zc3h12a LOC106573951 LOC106573951 LOC106572208 LOC106572208 LOC106574475 LOC106574475 tarbp2 tarbp2 LOC106606066 LOC106606066 LOC106599087 LOC106599087 LOC106601242 LOC106601242 LOC106570646 LOC106570646 LOC106613578 LOC106613578 LOC106613585 LOC106613585 LOC100380868 LOC100380868 LOC106560426 LOC106560426 LOC106583205 LOC106583205 zc3h10 zc3h10 ENSSSAP00000049389 ENSSSAP00000049389 LOC106605151 LOC106605151 LOC106570038 LOC106570038 ENSSSAP00000056542 ENSSSAP00000056542 ENSSSAP00000058286 ENSSSAP00000058286 LOC106607566 LOC106607566 LOC106607341 LOC106607341 LOC106570475 LOC106570475 LOC106604959 LOC106604959 LOC106611992 LOC106611992 LOC106589833 LOC106589833 LOC106585979 LOC106585979 spout1 spout1 YBX1 YBX1 LOC106589020 LOC106589020 LOC106612385 LOC106612385 ZC3H7B ZC3H7B LOC106605117 LOC106605117 LOC106569767 LOC106569767 pum2 pum2 LOC106582818 LOC106582818 i2c3 i2c3 PNPT1-2 PNPT1-2 ELAVL1 ELAVL1 LOC106588780 LOC106588780 LOC106588472 LOC106588472 pum1 pum1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ZC3H10Zinc finger CCCH domain-containing protein 10-like. (551 aa)
LOC106578158Pumilio homolog 1-like. (128 aa)
LOC106590917Terminal uridylyltransferase 7-like. (217 aa)
LOC106601915Suppressor of cytokine signaling 3-like. (212 aa)
LOC106568923Roquin-1-like isoform X2. (1085 aa)
z3h7aZinc finger CCCH domain-containing protein 7A isoform X2. (1008 aa)
LOC106606429-2Suppressor of cytokine signaling 3-like. (212 aa)
LOC106606429Suppressor of cytokine signaling 3-like. (212 aa)
PNPT1Polyribonucleotide nucleotidyltransferase 1, mitochondrial-like. (779 aa)
LOC106574070ELAV-like protein; Belongs to the RRM elav family. (374 aa)
LOC106584061Terminal uridylyltransferase 4-like isoform X2. (1565 aa)
zc3h12aRibonuclease ZC3H12A. (615 aa)
LOC106573951Roquin-1-like isoform X1. (960 aa)
LOC106572208Nuclease-sensitive element-binding protein 1-like isoform X1. (379 aa)
LOC106574475ELAV-like protein; Belongs to the RRM elav family. (357 aa)
tarbp2RISC-loading complex subunit TARBP2; Required for formation of the RNA induced silencing complex (RISC). Component of the RISC loading complex (RLC), also known as the micro-RNA (miRNA) loading complex (miRLC), which is composed of DICER1, AGO2 and TARBP2. Within the RLC/miRLC, DICER1 and TARBP2 are required to process precursor miRNAs (pre-miRNAs) to mature miRNAs and then load them onto AGO2. AGO2 bound to the mature miRNA constitutes the minimal RISC and may subsequently dissociate from DICER1 and TARBP2. May also play a role in the production of short interfering RNAs (siRNAs) from [...] (347 aa)
LOC106606066E3 ubiquitin-protein ligase TRIM71-like. (818 aa)
LOC106599087Roquin-1-like isoform X1. (1425 aa)
LOC106601242Zinc finger CCCH domain-containing protein 7B-like. (1019 aa)
LOC106570646E3 ubiquitin-protein ligase TRIM71-like. (824 aa)
LOC106613578ELAV-like protein; Belongs to the RRM elav family. (380 aa)
LOC106613585Roquin-1-like isoform X1. (1057 aa)
LOC100380868Terminal uridylyltransferase 7. (897 aa)
LOC106560426Terminal uridylyltransferase 4-like isoform X2. (1559 aa)
LOC106583205Ribonuclease ZC3H12A-like. (671 aa)
zc3h10Zinc finger CCCH domain-containing protein 10. (554 aa)
ENSSSAP00000049389Argonaute RISC catalytic component 2. (871 aa)
LOC106605151Protein argonaute-3-like. (922 aa)
LOC106570038Protein argonaute-4; Required for RNA-mediated gene silencing (RNAi). Binds to short RNAs such as microRNAs (miRNAs) and represses the translation of mRNAs which are complementary to them. Lacks endonuclease activity and does not appear to cleave target mRNAs; Belongs to the argonaute family. Ago subfamily. (887 aa)
ENSSSAP00000056542Pumilio RNA-binding family. (337 aa)
ENSSSAP00000058286Pumilio RNA-binding family. (71 aa)
LOC106607566Pumilio homolog 2-like isoform X5. (1211 aa)
LOC106607341Zinc finger CCCH domain-containing protein 7A-like isoform X1. (1019 aa)
LOC106570475Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include ago2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] (893 aa)
LOC106604959Fragile X mental retardation protein 1 homolog B-like isoform X2. (599 aa)
LOC106611992Fragile X mental retardation protein 1 homolog A-like isoform X4. (593 aa)
LOC106589833Suppressor of cytokine signaling 3-like. (223 aa)
LOC106585979LOW QUALITY PROTEIN: terminal uridylyltransferase 7-like. (1079 aa)
spout1CI114 protein. (398 aa)
YBX1Y-box binding protein-2 isoform X2. (322 aa)
LOC106589020Ribonuclease ZC3H12A-like. (700 aa)
LOC106612385Suppressor of cytokine signaling 3-like. (241 aa)
ZC3H7BZinc finger CCCH domain-containing protein 7B-like. (1002 aa)
LOC106605117Ribonuclease ZC3H12A-like. (662 aa)
LOC106569767Protein argonaute-3; Required for RNA-mediated gene silencing (RNAi). Binds to short RNAs such as microRNAs (miRNAs) and represses the translation of mRNAs which are complementary to them. Lacks endonuclease activity and does not appear to cleave target mRNAs; Belongs to the argonaute family. Ago subfamily. (878 aa)
pum2Pumilio homolog 2 isoform X2. (1211 aa)
LOC106582818Protein argonaute-1 isoform X7; Belongs to the argonaute family. (903 aa)
i2c3Eukaryotic translation initiation factor 2C 3. (889 aa)
PNPT1-2Polyribonucleotide nucleotidyltransferase 1, mitochondrial isoform X1. (777 aa)
ELAVL1ELAV-like protein; Belongs to the RRM elav family. (370 aa)
LOC106588780E3 ubiquitin-protein ligase TRIM71-like. (815 aa)
LOC106588472Protein argonaute-4; Required for RNA-mediated gene silencing (RNAi). Binds to short RNAs such as microRNAs (miRNAs) and represses the translation of mRNAs which are complementary to them. Lacks endonuclease activity and does not appear to cleave target mRNAs; Belongs to the argonaute family. Ago subfamily. (891 aa)
pum1Pumilio homolog 1 isoform X1. (1208 aa)
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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