34 items (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106583388	Interleukin-20-like. (181 aa)
	LOC106574504	Cytokine receptor-like factor 1. (402 aa)
	LOC106575188	Tumor necrosis factor receptor superfamily member 1A-like. (400 aa)
	LOC106609475	Insulin-like growth factor I isoform X1. (211 aa)
	LOC100136517	Insulin-like growth factor I isoform X1. (198 aa)
	ENSSSAP00000053338	annotation not available (192 aa)
	il6ra	Interleukin-6 receptor subunit alpha isoform X1. (818 aa)
	ENSSSAP00000054234	ADP-ribosylation factor-like 2 binding protein. (167 aa)
	LOC106604667	Uncharacterized protein LOC106604667 isoform X1. (513 aa)
	LOC100136580	Prolactin isoform X1. (220 aa)
	ENSSSAP00000069053	annotation not available (624 aa)
	LOC106604286	Interleukin-12 subunit beta; Belongs to the type I cytokine receptor family. Type 3 subfamily. (351 aa)
	ENSSSAP00000078996	annotation not available (404 aa)
	LOC106567123	Tumor necrosis factor receptor superfamily member 5-like. (317 aa)
	ENSSSAP00000074706	annotation not available (192 aa)
	LOC106613786	Cytokine receptor-like factor 1 isoform X3. (392 aa)
	LOC106612126	Interleukin-12 subunit beta; Belongs to the type I cytokine receptor family. Type 3 subfamily. (389 aa)
	LOC106571489	Interleukin-6 receptor subunit beta-like. (912 aa)
	pibf1	Progesterone-induced-blocking factor 1 isoform X1. (767 aa)
	LOC106600688	Poly [ADP-ribose] polymerase. (1866 aa)
	LOC106562893	Interleukin-6 receptor subunit beta-like isoform X1. (916 aa)
	ENSSSAP00000012773	annotation not available (595 aa)
	LOC106575321	Hemopexin; Binds heme and transports it to the liver for breakdown and iron recovery, after which the free hemopexin returns to the circulation. (447 aa)
	LOC106586807	Poly [ADP-ribose] polymerase. (305 aa)
	crlf1	Cytokine receptor-like factor 1 isoform X2. (411 aa)
	LOC106586830	Poly [ADP-ribose] polymerase. (391 aa)
	prl	Prolactin. (190 aa)
	tnr5	Tumor necrosis factor receptor superfamily member 5 precursor. (354 aa)
	ar2bp	ADP-ribosylation factor-like protein 2-binding protein. (182 aa)
	LOC106567437	Interleukin-12 subunit beta; Belongs to the type I cytokine receptor family. Type 3 subfamily. (320 aa)
	LOC106611678	Uncharacterized protein LOC106611678. (516 aa)
	tnr1a	Tumor necrosis factor receptor superfamily member 1A precursor. (404 aa)
	LOC106575381	Cytokine receptor-like factor 1 isoform X2. (441 aa)
	LOC106603888	Interleukin-12 subunit beta; Belongs to the type I cytokine receptor family. Type 3 subfamily. (323 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSSAP00000069053	LOC106562893	ENSSSAP00000069053	ENSSSAP00000008734	annotation not available	Interleukin-6 receptor subunit beta-like isoform X1.	0.970
ENSSSAP00000069053	LOC106571489	ENSSSAP00000069053	ENSSSAP00000069962	annotation not available	Interleukin-6 receptor subunit beta-like.	0.970
ENSSSAP00000069053	LOC106574504	ENSSSAP00000069053	ENSSSAP00000115867	annotation not available	Cytokine receptor-like factor 1.	0.426
ENSSSAP00000069053	LOC106575188	ENSSSAP00000069053	ENSSSAP00000051687	annotation not available	Tumor necrosis factor receptor superfamily member 1A-like.	0.526
ENSSSAP00000069053	LOC106575381	ENSSSAP00000069053	ENSSSAP00000102168	annotation not available	Cytokine receptor-like factor 1 isoform X2.	0.426
ENSSSAP00000069053	LOC106604667	ENSSSAP00000069053	ENSSSAP00000059037	annotation not available	Uncharacterized protein LOC106604667 isoform X1.	0.596
ENSSSAP00000069053	LOC106611678	ENSSSAP00000069053	ENSSSAP00000100139	annotation not available	Uncharacterized protein LOC106611678.	0.596
ENSSSAP00000069053	LOC106613786	ENSSSAP00000069053	ENSSSAP00000070930	annotation not available	Cytokine receptor-like factor 1 isoform X3.	0.426
ENSSSAP00000069053	crlf1	ENSSSAP00000069053	ENSSSAP00000018524	annotation not available	Cytokine receptor-like factor 1 isoform X2.	0.426
ENSSSAP00000069053	tnr1a	ENSSSAP00000069053	ENSSSAP00000100357	annotation not available	Tumor necrosis factor receptor superfamily member 1A precursor.	0.526
LOC100136580	LOC106574504	ENSSSAP00000063821	ENSSSAP00000115867	Prolactin isoform X1.	Cytokine receptor-like factor 1.	0.625
LOC100136580	LOC106575381	ENSSSAP00000063821	ENSSSAP00000102168	Prolactin isoform X1.	Cytokine receptor-like factor 1 isoform X2.	0.625
LOC100136580	LOC106609475	ENSSSAP00000063821	ENSSSAP00000040530	Prolactin isoform X1.	Insulin-like growth factor I isoform X1.	0.516
LOC100136580	LOC106613786	ENSSSAP00000063821	ENSSSAP00000070930	Prolactin isoform X1.	Cytokine receptor-like factor 1 isoform X3.	0.625
LOC100136580	crlf1	ENSSSAP00000063821	ENSSSAP00000018524	Prolactin isoform X1.	Cytokine receptor-like factor 1 isoform X2.	0.625
LOC106562893	ENSSSAP00000069053	ENSSSAP00000008734	ENSSSAP00000069053	Interleukin-6 receptor subunit beta-like isoform X1.	annotation not available	0.970
LOC106562893	LOC106604286	ENSSSAP00000008734	ENSSSAP00000085341	Interleukin-6 receptor subunit beta-like isoform X1.	Interleukin-12 subunit beta; Belongs to the type I cytokine receptor family. Type 3 subfamily.	0.504
LOC106562893	LOC106604667	ENSSSAP00000008734	ENSSSAP00000059037	Interleukin-6 receptor subunit beta-like isoform X1.	Uncharacterized protein LOC106604667 isoform X1.	0.949
LOC106562893	LOC106611678	ENSSSAP00000008734	ENSSSAP00000100139	Interleukin-6 receptor subunit beta-like isoform X1.	Uncharacterized protein LOC106611678.	0.513
LOC106562893	LOC106612126	ENSSSAP00000008734	ENSSSAP00000034690	Interleukin-6 receptor subunit beta-like isoform X1.	Interleukin-12 subunit beta; Belongs to the type I cytokine receptor family. Type 3 subfamily.	0.504