19 items (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106601048	Orexin-like. (151 aa)
	LOC106583505	Contactin-2-like. (1138 aa)
	LOC106589804	GDNF family receptor alpha-like. (533 aa)
	trh	Pro-thyrotropin-releasing hormone; Functions as a regulator of the biosynthesis of TSH in the anterior pituitary gland and as a neurotransmitter/ neuromodulator in the central and peripheral nervous systems. (258 aa)
	cck-n	cholecystokinin-N precursor. (158 aa)
	LOC106571889	Pro-thyrotropin-releasing hormone; Functions as a regulator of the biosynthesis of TSH in the anterior pituitary gland and as a neurotransmitter/ neuromodulator in the central and peripheral nervous systems. (256 aa)
	LOC106599003	Growth/differentiation factor 15-like. (379 aa)
	ENSSSAP00000097800	annotation not available (279 aa)
	LOC106569003	Transforming growth factor beta-1-like. (379 aa)
	LOC106565094	Contactin-2-like. (1043 aa)
	ENSSSAP00000054429	Prolactin releasing hormone. (89 aa)
	ENSSSAP00000052683	Cholecystokinin a. (169 aa)
	LOC106570651	Cholecystokinin-like. (167 aa)
	LOC106590145	BBSome-interacting protein 1-like. (67 aa)
	LOC106607390	Orexin-like. (149 aa)
	LOC106607294	Phosphoinositide phospholipase C. (1206 aa)
	cck-l	cholecystokinin-L isoform X1. (202 aa)
	LOC106601024	Phosphoinositide phospholipase C. (1206 aa)
	LOC106604585	Bardet-Biedl syndrome 12 protein-like. (641 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSSAP00000052683	LOC106571889	ENSSSAP00000052683	ENSSSAP00000110085	Cholecystokinin a.	Pro-thyrotropin-releasing hormone; Functions as a regulator of the biosynthesis of TSH in the anterior pituitary gland and as a neurotransmitter/ neuromodulator in the central and peripheral nervous systems.	0.525
ENSSSAP00000052683	LOC106601024	ENSSSAP00000052683	ENSSSAP00000007137	Cholecystokinin a.	Phosphoinositide phospholipase C.	0.516
ENSSSAP00000052683	LOC106601048	ENSSSAP00000052683	ENSSSAP00000007127	Cholecystokinin a.	Orexin-like.	0.516
ENSSSAP00000052683	LOC106607294	ENSSSAP00000052683	ENSSSAP00000021739	Cholecystokinin a.	Phosphoinositide phospholipase C.	0.516
ENSSSAP00000052683	LOC106607390	ENSSSAP00000052683	ENSSSAP00000021814	Cholecystokinin a.	Orexin-like.	0.516
ENSSSAP00000052683	trh	ENSSSAP00000052683	ENSSSAP00000113536	Cholecystokinin a.	Pro-thyrotropin-releasing hormone; Functions as a regulator of the biosynthesis of TSH in the anterior pituitary gland and as a neurotransmitter/ neuromodulator in the central and peripheral nervous systems.	0.525
ENSSSAP00000097800	LOC106590145	ENSSSAP00000097800	ENSSSAP00000022012	annotation not available	BBSome-interacting protein 1-like.	0.495
LOC106565094	LOC106583505	ENSSSAP00000055549	ENSSSAP00000118144	Contactin-2-like.	Contactin-2-like.	0.900
LOC106569003	LOC106589804	ENSSSAP00000097099	ENSSSAP00000113999	Transforming growth factor beta-1-like.	GDNF family receptor alpha-like.	0.965
LOC106569003	LOC106599003	ENSSSAP00000097099	ENSSSAP00000106967	Transforming growth factor beta-1-like.	Growth/differentiation factor 15-like.	0.901
LOC106570651	LOC106571889	ENSSSAP00000036871	ENSSSAP00000110085	Cholecystokinin-like.	Pro-thyrotropin-releasing hormone; Functions as a regulator of the biosynthesis of TSH in the anterior pituitary gland and as a neurotransmitter/ neuromodulator in the central and peripheral nervous systems.	0.525
LOC106570651	LOC106601024	ENSSSAP00000036871	ENSSSAP00000007137	Cholecystokinin-like.	Phosphoinositide phospholipase C.	0.516
LOC106570651	LOC106601048	ENSSSAP00000036871	ENSSSAP00000007127	Cholecystokinin-like.	Orexin-like.	0.516
LOC106570651	LOC106607294	ENSSSAP00000036871	ENSSSAP00000021739	Cholecystokinin-like.	Phosphoinositide phospholipase C.	0.516
LOC106570651	LOC106607390	ENSSSAP00000036871	ENSSSAP00000021814	Cholecystokinin-like.	Orexin-like.	0.516
LOC106570651	trh	ENSSSAP00000036871	ENSSSAP00000113536	Cholecystokinin-like.	Pro-thyrotropin-releasing hormone; Functions as a regulator of the biosynthesis of TSH in the anterior pituitary gland and as a neurotransmitter/ neuromodulator in the central and peripheral nervous systems.	0.525
LOC106571889	ENSSSAP00000052683	ENSSSAP00000110085	ENSSSAP00000052683	Pro-thyrotropin-releasing hormone; Functions as a regulator of the biosynthesis of TSH in the anterior pituitary gland and as a neurotransmitter/ neuromodulator in the central and peripheral nervous systems.	Cholecystokinin a.	0.525
LOC106571889	LOC106570651	ENSSSAP00000110085	ENSSSAP00000036871	Pro-thyrotropin-releasing hormone; Functions as a regulator of the biosynthesis of TSH in the anterior pituitary gland and as a neurotransmitter/ neuromodulator in the central and peripheral nervous systems.	Cholecystokinin-like.	0.525
LOC106571889	LOC106601024	ENSSSAP00000110085	ENSSSAP00000007137	Pro-thyrotropin-releasing hormone; Functions as a regulator of the biosynthesis of TSH in the anterior pituitary gland and as a neurotransmitter/ neuromodulator in the central and peripheral nervous systems.	Phosphoinositide phospholipase C.	0.670
LOC106571889	LOC106601048	ENSSSAP00000110085	ENSSSAP00000007127	Pro-thyrotropin-releasing hormone; Functions as a regulator of the biosynthesis of TSH in the anterior pituitary gland and as a neurotransmitter/ neuromodulator in the central and peripheral nervous systems.	Orexin-like.	0.670