STRINGSTRING
xpp3 xpp3 LOC106610576 LOC106610576 LOC106589530 LOC106589530 LOC106608859 LOC106608859 LOC106613337 LOC106613337 LOC106578012 LOC106578012 ENSSSAP00000023238 ENSSSAP00000023238 ENSSSAP00000027306 ENSSSAP00000027306 ENSSSAP00000027838 ENSSSAP00000027838 rb1 rb1 LOC106563563 LOC106563563 LOC106578852 LOC106578852 tf2b tf2b egf egf ENSSSAP00000092346 ENSSSAP00000092346 LOC106568989 LOC106568989 LOC100194632 LOC100194632 ski ski LOC106607167 LOC106607167 myocd myocd ENSSSAP00000074515 ENSSSAP00000074515 SKI SKI park2 park2 LOC106563255 LOC106563255 ercc2 ercc2 ENSSSAP00000060471 ENSSSAP00000060471 SIRT2 SIRT2 LOC106586966 LOC106586966 LOC106609475 LOC106609475 LOC106577817 LOC106577817 LOC100136517 LOC100136517 LOC106608924 LOC106608924 LOC106605607 LOC106605607 LOC100136559 LOC100136559
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
xpp3Histone acetyltransferase p300-like isoform X8. (2344 aa)
LOC106610576Thioredoxin; Belongs to the thioredoxin family. (110 aa)
LOC106589530CREB-binding protein-like isoform X4. (2921 aa)
LOC106608859Thioredoxin-like. (138 aa)
LOC106613337Transforming growth factor beta; Belongs to the TGF-beta family. (384 aa)
LOC106578012Urokinase plasminogen activator surface receptor-like. (230 aa)
ENSSSAP00000023238Urokinase plasminogen activator surface receptor-like. (150 aa)
ENSSSAP00000027306annotation not available (89 aa)
ENSSSAP00000027838annotation not available (93 aa)
rb1Retinoblastoma-associated protein. (910 aa)
LOC106563563Transforming growth factor beta; Belongs to the TGF-beta family. (390 aa)
LOC106578852Myocardin-like isoform X1. (1000 aa)
tf2bTranscription initiation factor IIB. (321 aa)
egfPro-epidermal growth factor isoform X1. (1198 aa)
ENSSSAP00000092346annotation not available (103 aa)
LOC106568989Transcription initiation factor IIB-like. (318 aa)
LOC100194632Endothelial differentiation-related factor 1-1. (148 aa)
skiSki oncogene. (729 aa)
LOC106607167Histone acetyltransferase p300-like isoform X9. (2695 aa)
myocdMyocardin isoform X1. (1028 aa)
ENSSSAP00000074515Excision repair cross-complementation group 2. (324 aa)
SKISki oncogene-like. (733 aa)
park2E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily. (460 aa)
LOC106563255Endothelial differentiation-related factor 1 homolog. (188 aa)
ercc2TFIIH basal transcription factor complex helicase subunit. (849 aa)
ENSSSAP00000060471annotation not available (89 aa)
SIRT2NAD-dependent protein deacetylase; NAD-dependent protein deacetylase. (413 aa)
LOC106586966Endothelial differentiation-related factor 1 homolog. (148 aa)
LOC106609475Insulin-like growth factor I isoform X1. (211 aa)
LOC106577817Thioredoxin; Belongs to the thioredoxin family. (108 aa)
LOC100136517Insulin-like growth factor I isoform X1. (198 aa)
LOC106608924Histone acetyltransferase p300-like isoform X2. (2752 aa)
LOC106605607Urokinase plasminogen activator surface receptor-like. (228 aa)
LOC100136559Transforming growth factor beta; Belongs to the TGF-beta family. (381 aa)
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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