52 items (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSSAP00000056455	annotation not available (204 aa)
	LOC106592175	Coiled-coil domain-containing protein 14-like isoform X1. (856 aa)
	ENSSSAP00000057812	GAS2-like protein 1. (329 aa)
	ENSSSAP00000058739	Bardet-Biedl syndrome 4 protein-like. (136 aa)
	LOC106575281	E3 ubiquitin-protein ligase Midline-1-like. (685 aa)
	HTR2A	5-hydroxytryptamine receptor 2A-like. (511 aa)
	LOC106613133	Tripartite motif-containing protein 42-like. (609 aa)
	LOC106602553	Pericentriolar material 1 protein-like isoform X3. (2170 aa)
	ENSSSAP00000064391	Midline 2. (217 aa)
	LOC106604185	Probable E3 ubiquitin-protein ligase MID2 isoform X2. (518 aa)
	LOC106612188	E3 ubiquitin-protein ligase Midline-1-like. (230 aa)
	ENSSSAP00000072229	Growth arrest specific 2 like 2. (214 aa)
	gas2l2	GAS2-like protein 2 isoform X2. (698 aa)
	LOC106560769	Bardet-Biedl syndrome 4 protein-like isoform X1. (526 aa)
	LOC106587478	Growth arrest-specific protein 2-like. (451 aa)
	klhl21	Kelch-like protein 21. (628 aa)
	BBS4	Bardet-Biedl syndrome 4 protein-like. (523 aa)
	LOC106611329	Microtubule-associated protein RP/EB family member 3-like. (262 aa)
	cep350	Centrosome-associated protein 350 isoform X4. (3029 aa)
	LOC106599798	Microtubule-associated protein RP/EB family member 2-like isoform X1. (337 aa)
	MID1	E3 ubiquitin-protein ligase Midline-1-like. (718 aa)
	LOC106584317	Centrosome-associated protein 350-like isoform X5. (2971 aa)
	mapre1	Microtubule-associated protein, RP/EB family member 1. (255 aa)
	c2cd3	C2 domain-containing protein 3 isoform X2. (2171 aa)
	LOC106566800	Microtubule-associated protein RP/EB family member 1-like. (288 aa)
	LOC106581913	E3 ubiquitin-protein ligase Midline-1 isoform X2. (714 aa)
	LOC106572566	Kelch-like protein 21. (621 aa)
	HTR2A-2	5-hydroxytryptamine receptor 2A. (508 aa)
	LOC106582888	Protein FAM83D-like isoform X1. (597 aa)
	mapre2	Microtubule-associated protein RP/EB family member 2 isoform X1. (341 aa)
	LOC106591799	Microtubule-associated protein RP/EB family member 3-like. (340 aa)
	ENSSSAP00000019002	annotation not available (126 aa)
	LOC106589816	Microcephalin-like isoform X4. (473 aa)
	wrap73	WD repeat-containing protein WRAP73. (463 aa)
	LOC106565780	Protein FAM83D-like. (562 aa)
	mcph1	Microcephalin isoform X1. (886 aa)
	LOC106563525	Growth arrest-specific protein 2-like isoform X1. (455 aa)
	ENSSSAP00000012773	annotation not available (595 aa)
	LOC106590754	Centrosomal protein of 192 kDa-like isoform X3. (300 aa)
	stil	SCL-interrupting locus protein. (1246 aa)
	LOC106609941	Pericentriolar material 1 protein-like isoform X1. (2140 aa)
	pibf1	Progesterone-induced-blocking factor 1 isoform X1. (767 aa)
	LOC106574078	LOW QUALITY PROTEIN: SCL-interrupting locus protein homolog. (362 aa)
	LOC106584974	GAS2-like protein 1. (1111 aa)
	LOC106603641	Microtubule-associated protein RP/EB family member 3-like isoform X2. (262 aa)
	LOC106586808	E3 ubiquitin-protein ligase Midline-1-like isoform X2. (692 aa)
	ENSSSAP00000040157	annotation not available (1998 aa)
	LOC106612787	Uncharacterized serine/threonine-protein kinase SgK494-like isoform X3. (432 aa)
	ENSSSAP00000048576	annotation not available (119 aa)
	LOC106612783	Uncharacterized protein KIAA0753-like isoform X2. (348 aa)
	ENSSSAP00000050153	Uncharacterized protein KIAA0753-like. (278 aa)
	mare1	Microtubule-associated protein RP/EB family member 1 isoform X1. (274 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BBS4	ENSSSAP00000048576	ENSSSAP00000079394	ENSSSAP00000048576	Bardet-Biedl syndrome 4 protein-like.	annotation not available	0.743
BBS4	LOC106590754	ENSSSAP00000079394	ENSSSAP00000005697	Bardet-Biedl syndrome 4 protein-like.	Centrosomal protein of 192 kDa-like isoform X3.	0.442
BBS4	LOC106602553	ENSSSAP00000079394	ENSSSAP00000063880	Bardet-Biedl syndrome 4 protein-like.	Pericentriolar material 1 protein-like isoform X3.	0.743
BBS4	LOC106609941	ENSSSAP00000079394	ENSSSAP00000032489	Bardet-Biedl syndrome 4 protein-like.	Pericentriolar material 1 protein-like isoform X1.	0.743
ENSSSAP00000012773	ENSSSAP00000040157	ENSSSAP00000012773	ENSSSAP00000040157	annotation not available	annotation not available	0.595
ENSSSAP00000012773	LOC106592175	ENSSSAP00000012773	ENSSSAP00000057341	annotation not available	Coiled-coil domain-containing protein 14-like isoform X1.	0.595
ENSSSAP00000019002	LOC106574078	ENSSSAP00000019002	ENSSSAP00000020587	annotation not available	LOW QUALITY PROTEIN: SCL-interrupting locus protein homolog.	0.504
ENSSSAP00000019002	stil	ENSSSAP00000019002	ENSSSAP00000038080	annotation not available	SCL-interrupting locus protein.	0.504
ENSSSAP00000040157	ENSSSAP00000012773	ENSSSAP00000040157	ENSSSAP00000012773	annotation not available	annotation not available	0.595
ENSSSAP00000040157	ENSSSAP00000048576	ENSSSAP00000040157	ENSSSAP00000048576	annotation not available	annotation not available	0.451
ENSSSAP00000040157	ENSSSAP00000050153	ENSSSAP00000040157	ENSSSAP00000050153	annotation not available	Uncharacterized protein KIAA0753-like.	0.642
ENSSSAP00000040157	LOC106602553	ENSSSAP00000040157	ENSSSAP00000063880	annotation not available	Pericentriolar material 1 protein-like isoform X3.	0.451
ENSSSAP00000040157	LOC106609941	ENSSSAP00000040157	ENSSSAP00000032489	annotation not available	Pericentriolar material 1 protein-like isoform X1.	0.451
ENSSSAP00000040157	LOC106612783	ENSSSAP00000040157	ENSSSAP00000050146	annotation not available	Uncharacterized protein KIAA0753-like isoform X2.	0.642
ENSSSAP00000040157	pibf1	ENSSSAP00000040157	ENSSSAP00000030962	annotation not available	Progesterone-induced-blocking factor 1 isoform X1.	0.595
ENSSSAP00000048576	BBS4	ENSSSAP00000048576	ENSSSAP00000079394	annotation not available	Bardet-Biedl syndrome 4 protein-like.	0.743
ENSSSAP00000048576	ENSSSAP00000040157	ENSSSAP00000048576	ENSSSAP00000040157	annotation not available	annotation not available	0.451
ENSSSAP00000048576	ENSSSAP00000050153	ENSSSAP00000048576	ENSSSAP00000050153	annotation not available	Uncharacterized protein KIAA0753-like.	0.521
ENSSSAP00000048576	ENSSSAP00000056455	ENSSSAP00000048576	ENSSSAP00000056455	annotation not available	annotation not available	0.743
ENSSSAP00000048576	ENSSSAP00000058739	ENSSSAP00000048576	ENSSSAP00000058739	annotation not available	Bardet-Biedl syndrome 4 protein-like.	0.743