STRINGSTRING
LOC106604178 LOC106604178 cdh26 cdh26 LOC106564751 LOC106564751 ctnnb1 ctnnb1 ENSSSAP00000037686 ENSSSAP00000037686 LOC106612624 LOC106612624 LOC106577795 LOC106577795 LOC106571918 LOC106571918 LOC106571916 LOC106571916 LOC106608849 LOC106608849 LOC106600820 LOC106600820 pkp3 pkp3 LOC106611807 LOC106611807 ENSSSAP00000006163 ENSSSAP00000006163 LOC106580830 LOC106580830 plak plak VCL VCL LOC106587473 LOC106587473 LOC106584766 LOC106584766
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC106604178Vinculin-like isoform X2. (1128 aa)
cdh26Cadherin-like protein 26; Cadherins are calcium-dependent cell adhesion proteins. (909 aa)
LOC106564751Junction plakoglobin-like. (734 aa)
ctnnb1Catenin beta-1. (790 aa)
ENSSSAP00000037686annotation not available (622 aa)
LOC106612624Numb-like protein isoform X1. (682 aa)
LOC106577795LIM domain-containing protein ajuba-like isoform X2. (719 aa)
LOC106571918Cadherin-13-like. (891 aa)
LOC106571916Cadherin-like protein 26; Cadherins are calcium-dependent cell adhesion proteins. (852 aa)
LOC106608849LIM domain-containing protein ajuba-like. (714 aa)
LOC106600820Junction plakoglobin-like isoform X1. (774 aa)
pkp3Plakophilin 3 isoform X1. (816 aa)
LOC106611807Vinculin isoform X1. (1068 aa)
ENSSSAP00000006163annotation not available (796 aa)
LOC106580830Numb-like protein isoform X2. (653 aa)
plakJunction plakoglobin isoform X1. (732 aa)
VCLVinculin-like isoform X2. (1091 aa)
LOC106587473Plakophilin-3-like isoform X2. (852 aa)
LOC106584766Plakophilin-3-like. (892 aa)
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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