43 items (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106603518	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1687 aa)
	LOC106612160	Cytochrome C oxidase assembly protein COX11, mitochondrial. (271 aa)
	LOC106600693	AP-2 complex subunit alpha; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...] (986 aa)
	LOC106608924	Histone acetyltransferase p300-like isoform X2. (2752 aa)
	LOC100136559	Transforming growth factor beta; Belongs to the TGF-beta family. (381 aa)
	LOC106609462	Fructose-2,6-bisphosphatase TIGAR B-like. (271 aa)
	LOC106609579	Protein FAM3C-like. (225 aa)
	xpp3	Histone acetyltransferase p300-like isoform X8. (2344 aa)
	ENSSSAP00000010011	Folliculin. (566 aa)
	LOC106577129	Folliculin-like. (566 aa)
	LOC106589530	CREB-binding protein-like isoform X4. (2921 aa)
	fam3a	Protein FAM3A isoform X1. (229 aa)
	ENSSSAP00000027775	annotation not available (82 aa)
	LOC106573601	Midnolin-like. (573 aa)
	LOC106585059	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1683 aa)
	LOC106576502	Protein FAM3C-like. (225 aa)
	LOC106573651	Sphingomyelin phosphodiesterase 3-like. (665 aa)
	cl005	Salmo salar CL005 protein (cl005), mRNA. (293 aa)
	LOC106613337	Transforming growth factor beta; Belongs to the TGF-beta family. (384 aa)
	ENSSSAP00000060471	annotation not available (89 aa)
	adipoq	Adiponectin. (296 aa)
	ENSSSAP00000064074	annotation not available (359 aa)
	park2	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily. (460 aa)
	lepr	Leptin receptor isoform X1. (1146 aa)
	LOC106613743	Midnolin-like. (554 aa)
	ENSSSAP00000073313	annotation not available (76 aa)
	LOC106612978	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1737 aa)
	pask	PAS domain-containing serine/threonine-protein kinase isoform X2. (1239 aa)
	LOC106607167	Histone acetyltransferase p300-like isoform X9. (2695 aa)
	LOC106567969	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1684 aa)
	ENSSSAP00000088890	annotation not available (195 aa)
	ENSSSAP00000088906	Protein SOGA1-like. (1394 aa)
	LOC106583920	AP-2 complex subunit alpha; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...] (986 aa)
	LOC106585901	Uncharacterized protein LOC106585901. (207 aa)
	LOC106560916	Sphingomyelin phosphodiesterase 3-like. (673 aa)
	LOC106566796	Protein SOGA1-like isoform X2. (1828 aa)
	LOC106563563	Transforming growth factor beta; Belongs to the TGF-beta family. (390 aa)
	LOC106581108	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1686 aa)
	ENSSSAP00000114968	annotation not available (273 aa)
	LOC106580423	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1668 aa)
	LOC106569548	Midnolin-like isoform X1. (412 aa)
	sirt6	NAD-dependent protein deacetylase sirtuin-6 isoform X1. (383 aa)
	lepr2	Leptin receptor-like isoform X1. (1147 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSSAP00000027775	LOC106583920	ENSSSAP00000027775	ENSSSAP00000093551	annotation not available	AP-2 complex subunit alpha; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...]	0.838
ENSSSAP00000027775	LOC106600693	ENSSSAP00000027775	ENSSSAP00000002223	annotation not available	AP-2 complex subunit alpha; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...]	0.838
LOC100136559	LOC106563563	ENSSSAP00000004983	ENSSSAP00000109831	Transforming growth factor beta; Belongs to the TGF-beta family.	Transforming growth factor beta; Belongs to the TGF-beta family.	0.900
LOC100136559	LOC106589530	ENSSSAP00000004983	ENSSSAP00000020738	Transforming growth factor beta; Belongs to the TGF-beta family.	CREB-binding protein-like isoform X4.	0.515
LOC100136559	LOC106607167	ENSSSAP00000004983	ENSSSAP00000081005	Transforming growth factor beta; Belongs to the TGF-beta family.	Histone acetyltransferase p300-like isoform X9.	0.515
LOC100136559	LOC106608924	ENSSSAP00000004983	ENSSSAP00000003652	Transforming growth factor beta; Belongs to the TGF-beta family.	Histone acetyltransferase p300-like isoform X2.	0.515
LOC100136559	LOC106613337	ENSSSAP00000004983	ENSSSAP00000053777	Transforming growth factor beta; Belongs to the TGF-beta family.	Transforming growth factor beta; Belongs to the TGF-beta family.	0.901
LOC100136559	xpp3	ENSSSAP00000004983	ENSSSAP00000005298	Transforming growth factor beta; Belongs to the TGF-beta family.	Histone acetyltransferase p300-like isoform X8.	0.515
LOC106563563	LOC100136559	ENSSSAP00000109831	ENSSSAP00000004983	Transforming growth factor beta; Belongs to the TGF-beta family.	Transforming growth factor beta; Belongs to the TGF-beta family.	0.900
LOC106563563	LOC106589530	ENSSSAP00000109831	ENSSSAP00000020738	Transforming growth factor beta; Belongs to the TGF-beta family.	CREB-binding protein-like isoform X4.	0.515
LOC106563563	LOC106607167	ENSSSAP00000109831	ENSSSAP00000081005	Transforming growth factor beta; Belongs to the TGF-beta family.	Histone acetyltransferase p300-like isoform X9.	0.515
LOC106563563	LOC106608924	ENSSSAP00000109831	ENSSSAP00000003652	Transforming growth factor beta; Belongs to the TGF-beta family.	Histone acetyltransferase p300-like isoform X2.	0.515
LOC106563563	LOC106613337	ENSSSAP00000109831	ENSSSAP00000053777	Transforming growth factor beta; Belongs to the TGF-beta family.	Transforming growth factor beta; Belongs to the TGF-beta family.	0.901
LOC106563563	xpp3	ENSSSAP00000109831	ENSSSAP00000005298	Transforming growth factor beta; Belongs to the TGF-beta family.	Histone acetyltransferase p300-like isoform X8.	0.515
LOC106567969	LOC106583920	ENSSSAP00000086397	ENSSSAP00000093551	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	AP-2 complex subunit alpha; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...]	0.966
LOC106567969	LOC106600693	ENSSSAP00000086397	ENSSSAP00000002223	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	AP-2 complex subunit alpha; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...]	0.966
LOC106580423	LOC106583920	ENSSSAP00000116615	ENSSSAP00000093551	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	AP-2 complex subunit alpha; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...]	0.966
LOC106580423	LOC106600693	ENSSSAP00000116615	ENSSSAP00000002223	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	AP-2 complex subunit alpha; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...]	0.966
LOC106581108	LOC106583920	ENSSSAP00000111377	ENSSSAP00000093551	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	AP-2 complex subunit alpha; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...]	0.966
LOC106581108	LOC106600693	ENSSSAP00000111377	ENSSSAP00000002223	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	AP-2 complex subunit alpha; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...]	0.966