29 items (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106593637	Caspase recruitment domain-containing protein 11-like isoform X1. (175 aa)
	LOC106613845	Tyrosine-protein kinase. (613 aa)
	LOC106583663	E3 ubiquitin-protein ligase. (858 aa)
	LOC106612126	Interleukin-12 subunit beta; Belongs to the type I cytokine receptor family. Type 3 subfamily. (389 aa)
	LOC106569286	DNA helicase; Belongs to the MCM family. (826 aa)
	LOC106603287	Galectin. (355 aa)
	RIPK2	Receptor-interacting serine/threonine-protein kinase 2-like isoform X1. (587 aa)
	vsir	Platelet receptor Gi24 isoform X2. (301 aa)
	LOC106593089	Caspase recruitment domain-containing protein 11-like. (223 aa)
	LOC106587145	Receptor-interacting serine/threonine-protein kinase 2-like. (528 aa)
	irf1	Interferon regulatory factor. (334 aa)
	ptprc	Receptor-type tyrosine-protein phosphatase C isoform X1. (1412 aa)
	LOC106572808	Tumor necrosis factor receptor superfamily member 14-like isoform X1. (263 aa)
	irf1-2	Interferon regulatory factor. (332 aa)
	LOC106560245	E3 ubiquitin-protein ligase SH3RF1-like isoform X1. (877 aa)
	LOC106604286	Interleukin-12 subunit beta; Belongs to the type I cytokine receptor family. Type 3 subfamily. (351 aa)
	LOC106613095	Galectin. (387 aa)
	LOC106568754	Receptor-interacting serine/threonine-protein kinase 2-like isoform X1. (598 aa)
	tgfr2	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (549 aa)
	LOC106566898	E3 ubiquitin-protein ligase. (886 aa)
	LOC106567757	Galectin. (347 aa)
	syk	Tyrosine-protein kinase. (624 aa)
	LOC106572363	E3 ubiquitin-protein ligase. (884 aa)
	TGFBR2	TGF-beta receptor type-2; Transmembrane serine/threonine kinase forming with the TGF- beta type I serine/threonine kinase receptor, TGFBR1, the non- promiscuous receptor for the TGF-beta cytokines TGFB1, TGFB2 and TGFB3. Transduces the TGFB1, TGFB2 and TGFB3 signal from the cell surface to the cytoplasm and is thus regulating a plethora of physiological and pathological processes including cell cycle arrest in epithelial and hematopoietic cells, control of mesenchymal cell proliferation and differentiation, wound healing, extracellular matrix production, immunosuppression and carcinoge [...] (571 aa)
	LOC106584225	E3 ubiquitin-protein ligase SH3RF1-like. (880 aa)
	LOC106565280	E3 ubiquitin-protein ligase. (870 aa)
	LOC106562048	Receptor-interacting serine/threonine-protein kinase 2-like isoform X2. (541 aa)
	LOC106584369	Tyrosine-protein kinase. (633 aa)
	LOC106606173	TGF-beta receptor type-2; Transmembrane serine/threonine kinase forming with the TGF- beta type I serine/threonine kinase receptor, TGFBR1, the non- promiscuous receptor for the TGF-beta cytokines TGFB1, TGFB2 and TGFB3. Transduces the TGFB1, TGFB2 and TGFB3 signal from the cell surface to the cytoplasm and is thus regulating a plethora of physiological and pathological processes including cell cycle arrest in epithelial and hematopoietic cells, control of mesenchymal cell proliferation and differentiation, wound healing, extracellular matrix production, immunosuppression and carcinoge [...] (582 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC106562048	LOC106565280	ENSSSAP00000081648	ENSSSAP00000117713	Receptor-interacting serine/threonine-protein kinase 2-like isoform X2.	E3 ubiquitin-protein ligase.	0.503
LOC106562048	LOC106566898	ENSSSAP00000081648	ENSSSAP00000092345	Receptor-interacting serine/threonine-protein kinase 2-like isoform X2.	E3 ubiquitin-protein ligase.	0.503
LOC106562048	LOC106572363	ENSSSAP00000081648	ENSSSAP00000109664	Receptor-interacting serine/threonine-protein kinase 2-like isoform X2.	E3 ubiquitin-protein ligase.	0.503
LOC106562048	LOC106583663	ENSSSAP00000081648	ENSSSAP00000031661	Receptor-interacting serine/threonine-protein kinase 2-like isoform X2.	E3 ubiquitin-protein ligase.	0.503
LOC106562048	LOC106593089	ENSSSAP00000081648	ENSSSAP00000053220	Receptor-interacting serine/threonine-protein kinase 2-like isoform X2.	Caspase recruitment domain-containing protein 11-like.	0.539
LOC106562048	LOC106593637	ENSSSAP00000081648	ENSSSAP00000020382	Receptor-interacting serine/threonine-protein kinase 2-like isoform X2.	Caspase recruitment domain-containing protein 11-like isoform X1.	0.539
LOC106565280	LOC106562048	ENSSSAP00000117713	ENSSSAP00000081648	E3 ubiquitin-protein ligase.	Receptor-interacting serine/threonine-protein kinase 2-like isoform X2.	0.503
LOC106565280	LOC106568754	ENSSSAP00000117713	ENSSSAP00000090100	E3 ubiquitin-protein ligase.	Receptor-interacting serine/threonine-protein kinase 2-like isoform X1.	0.503
LOC106565280	LOC106587145	ENSSSAP00000117713	ENSSSAP00000055179	E3 ubiquitin-protein ligase.	Receptor-interacting serine/threonine-protein kinase 2-like.	0.503
LOC106565280	RIPK2	ENSSSAP00000117713	ENSSSAP00000051785	E3 ubiquitin-protein ligase.	Receptor-interacting serine/threonine-protein kinase 2-like isoform X1.	0.503
LOC106566898	LOC106562048	ENSSSAP00000092345	ENSSSAP00000081648	E3 ubiquitin-protein ligase.	Receptor-interacting serine/threonine-protein kinase 2-like isoform X2.	0.503
LOC106566898	LOC106568754	ENSSSAP00000092345	ENSSSAP00000090100	E3 ubiquitin-protein ligase.	Receptor-interacting serine/threonine-protein kinase 2-like isoform X1.	0.503
LOC106566898	LOC106587145	ENSSSAP00000092345	ENSSSAP00000055179	E3 ubiquitin-protein ligase.	Receptor-interacting serine/threonine-protein kinase 2-like.	0.503
LOC106566898	RIPK2	ENSSSAP00000092345	ENSSSAP00000051785	E3 ubiquitin-protein ligase.	Receptor-interacting serine/threonine-protein kinase 2-like isoform X1.	0.503
LOC106567757	ptprc	ENSSSAP00000103429	ENSSSAP00000079402	Galectin.	Receptor-type tyrosine-protein phosphatase C isoform X1.	0.608
LOC106568754	LOC106565280	ENSSSAP00000090100	ENSSSAP00000117713	Receptor-interacting serine/threonine-protein kinase 2-like isoform X1.	E3 ubiquitin-protein ligase.	0.503
LOC106568754	LOC106566898	ENSSSAP00000090100	ENSSSAP00000092345	Receptor-interacting serine/threonine-protein kinase 2-like isoform X1.	E3 ubiquitin-protein ligase.	0.503
LOC106568754	LOC106572363	ENSSSAP00000090100	ENSSSAP00000109664	Receptor-interacting serine/threonine-protein kinase 2-like isoform X1.	E3 ubiquitin-protein ligase.	0.503
LOC106568754	LOC106583663	ENSSSAP00000090100	ENSSSAP00000031661	Receptor-interacting serine/threonine-protein kinase 2-like isoform X1.	E3 ubiquitin-protein ligase.	0.503
LOC106568754	LOC106593089	ENSSSAP00000090100	ENSSSAP00000053220	Receptor-interacting serine/threonine-protein kinase 2-like isoform X1.	Caspase recruitment domain-containing protein 11-like.	0.557