STRINGSTRING
catsperd catsperd rtn4ip1 rtn4ip1 LOC106575691-2 LOC106575691-2 LOC106562454 LOC106562454 LOC106562486 LOC106562486 LOC106614018 LOC106614018 LOC106575691 LOC106575691 ENSSSAP00000034674 ENSSSAP00000034674 LOC106584254 LOC106584254 ropn1l ropn1l pcbd2 pcbd2 efcab9 efcab9 ENSSSAP00000087081 ENSSSAP00000087081 LOC106572824 LOC106572824 LOC106581727 LOC106581727 LOC106561096 LOC106561096 CATSPER2 CATSPER2 ccr6 ccr6 LOC106578423 LOC106578423 LOC106599672 LOC106599672
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
catsperdCation channel sperm-associated protein subunit delta isoform X1. (761 aa)
rtn4ip1C-C chemokine receptor type 6-like; Belongs to the G-protein coupled receptor 1 family. (462 aa)
LOC106575691-2Ropporin-1-like. (241 aa)
LOC106562454Abhydrolase domain-containing protein 2-A. (388 aa)
LOC106562486Abhydrolase domain-containing protein 2-A-like. (306 aa)
LOC106614018Uncharacterized protein LOC106614018. (70 aa)
LOC106575691Ropporin-1-like. (279 aa)
ENSSSAP00000034674annotation not available (151 aa)
LOC106584254Uncharacterized protein LOC106584254 isoform X2. (72 aa)
ropn1lRopporin-1-like protein isoform X2. (229 aa)
pcbd2Cation channel sperm-associated protein 3 isoform X1. (416 aa)
efcab9EF-hand calcium-binding domain-containing protein 9 isoform X1. (216 aa)
ENSSSAP00000087081annotation not available (467 aa)
LOC106572824C-C chemokine receptor type 6-like; Belongs to the G-protein coupled receptor 1 family. (371 aa)
LOC106581727Ropporin-1-like. (295 aa)
LOC106561096Abhydrolase domain-containing protein 2-B-like. (468 aa)
CATSPER2Cation channel sperm-associated protein 2 isoform X2. (496 aa)
ccr6C-C chemokine receptor type 6; Belongs to the G-protein coupled receptor 1 family. (392 aa)
LOC106578423Ropporin-1-like protein. (186 aa)
LOC106599672Uncharacterized protein LOC106599672. (89 aa)
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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