STRINGSTRING
LOC106585251 LOC106585251 LOC106579553 LOC106579553 LOC106590409 LOC106590409 LOC106560349 LOC106560349 CDH2-2 CDH2-2 LOC106580334 LOC106580334 CDH2 CDH2 LOC106584192 LOC106584192
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC106585251Nodal homolog. (400 aa)
LOC106579553Forkhead box protein H1-like isoform X2. (482 aa)
LOC106590409Forkhead box protein H1-like. (571 aa)
LOC106560349Cadherin-2-like; Cadherins are calcium-dependent cell adhesion proteins. (920 aa)
CDH2-2Cadherin-2-like; Cadherins are calcium-dependent cell adhesion proteins. (948 aa)
LOC106580334Nodal homolog. (442 aa)
CDH2Cadherin-2-like; Cadherins are calcium-dependent cell adhesion proteins. (926 aa)
LOC106584192Cadherin 2, type 1, N-cadherin. (928 aa)
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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