98 items (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106568215	Transmembrane protein 119-like isoform X1. (267 aa)
	LOC106565805	RNA-binding protein 38-like. (240 aa)
	CAV3-2	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (154 aa)
	LOC106609842	Class A basic helix-loop-helix protein 15-like. (191 aa)
	LOC106563948	Mothers against decapentaplegic homolog. (554 aa)
	carm1	Histone-arginine methyltransferase CARM1 isoform X3; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (641 aa)
	LOC106606043	RNA-binding protein 24-B-like. (128 aa)
	LOC106605865	Glycogen synthase kinase-3 alpha-like; Belongs to the protein kinase superfamily. (432 aa)
	parp2	Poly [ADP-ribose] polymerase. (658 aa)
	ENSSSAP00000012120	annotation not available (433 aa)
	LOC106564485	Transmembrane protein 119-like. (202 aa)
	LOC106611121	Bone morphogenetic protein 4-like. (407 aa)
	GSK3B	Glycogen synthase kinase-3 beta-like; Belongs to the protein kinase superfamily. (629 aa)
	LOC106570222	RNA polymerase II subunit A C-terminal domain phosphatase-like isoform X1. (1043 aa)
	tomm70a	Mitochondrial import receptor subunit TOM70. (614 aa)
	LOC106570392	Endothelin-1-like. (203 aa)
	LOC106584620	Transcription factor SOX5/6/13 (SOX group D). (835 aa)
	ENSSSAP00000021569	annotation not available (128 aa)
	ENSSSAP00000022131	annotation not available (249 aa)
	ENSSSAP00000022354	annotation not available (128 aa)
	ENSSSAP00000023442	annotation not available (396 aa)
	ENSSSAP00000024039	annotation not available (249 aa)
	ENSSSAP00000026253	Histone-arginine methyltransferase CARM1-like. (180 aa)
	LOC106588593	RNA polymerase II subunit A C-terminal domain phosphatase-like isoform X1. (1037 aa)
	CCN3	Protein NOV-like isoform X1. (349 aa)
	TRIM32	E3 ubiquitin-protein ligase TRIM32-like. (678 aa)
	dkk1	Dickkopf-related protein 1 isoform X1. (294 aa)
	GSK3B-2	Glycogen synthase kinase-3 beta isoform X1; Belongs to the protein kinase superfamily. (443 aa)
	LOC106565204	Homeobox protein XHOX-7.1-like. (282 aa)
	bhlh3	Class B basic helix-loop-helix protein 3. (435 aa)
	GSK3B-3	Glycogen synthase kinase-3 beta-like isoform X4; Belongs to the protein kinase superfamily. (448 aa)
	LOC106609475	Insulin-like growth factor I isoform X1. (211 aa)
	LOC106612166	Homeobox protein Nkx-2.5-like. (315 aa)
	LOC106580167	Mothers against decapentaplegic homolog. (579 aa)
	LOC106562410	F-box only protein 22-like. (387 aa)
	mtor	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family. (2569 aa)
	LOC106588906	RNA-binding protein 24. (233 aa)
	Sox6	Transcription factor SOX5/6/13 (SOX group D). (244 aa)
	LOC106612383	Bone morphogenetic protein 2-like isoform X1. (491 aa)
	bmp4	Bone morphogenetic protein 4 precursor. (407 aa)
	LOC100136517	Insulin-like growth factor I isoform X1. (198 aa)
	LOC106572096	Peptidase inhibitor 16-like; Belongs to the CRISP family. (336 aa)
	ENSSSAP00000056743	annotation not available (376 aa)
	LOC106563269	E3 ubiquitin-protein ligase TRIM32-like. (675 aa)
	cav3	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (154 aa)
	LOC106583593	Homeobox protein XHOX-7.1-like. (283 aa)
	LOC106589580	Class A basic helix-loop-helix protein 15-like. (193 aa)
	ENSSSAP00000061339	annotation not available (245 aa)
	ENSSSAP00000061457	annotation not available (128 aa)
	LOC106588319	Mothers against decapentaplegic homolog. (587 aa)
	LOC106573785	Uncharacterized protein LOC106573785. (279 aa)
	PLPP7	Probable lipid phosphate phosphatase PPAPDC3. (288 aa)
	LOC106563251	Histone-lysine N-methyltransferase Smyd1-like. (488 aa)
	rbm24	RNA-binding protein 24. (232 aa)
	LOC106576382	Glycogen synthase kinase-3 beta-like; Belongs to the protein kinase superfamily. (443 aa)
	LOC106561060	Transcription factor SOX-6-like isoform X1. (784 aa)
	ENSSSAP00000067350	annotation not available (226 aa)
	ENSSSAP00000067545	annotation not available (226 aa)
	ENSSSAP00000067786	annotation not available (226 aa)
	LOC106568180	Mothers against decapentaplegic homolog. (548 aa)
	LOC106573310	LOW QUALITY PROTEIN: class E basic helix-loop-helix protein 41-like. (430 aa)
	LOC106593572	Uncharacterized protein LOC106593572 isoform X1. (719 aa)
	LOC106566975	Mitogen-activated protein kinase. (400 aa)
	LOC106571937	RNA-binding protein 38-like. (247 aa)
	GSK3B-4	Glycogen synthase kinase 3 beta. (443 aa)
	LOC106589028	Uncharacterized protein LOC106589028. (275 aa)
	LOC106566727	RNA-binding protein 38-like. (246 aa)
	p38a	Mitogen-activated protein kinase. (374 aa)
	sox6	Transcription factor SOX-6. (817 aa)
	LOC106565613	Histone-lysine N-methyltransferase Smyd1-like. (490 aa)
	LOC106565683	Probable lipid phosphate phosphatase PPAPDC3. (288 aa)
	AKAP6	A-kinase anchor protein 6. (2315 aa)
	ENSSSAP00000086864	X-box binding protein 1. (260 aa)
	LOC106589228	Dickkopf-related protein 1-like. (246 aa)
	LOC106588417	Glycogen synthase kinase-3 beta-like. (447 aa)
	LOC106582916	RNA-binding protein 38-like isoform X1. (239 aa)
	xbp1	X-box-binding protein 1. (261 aa)
	LOC106580203	Probable lipid phosphate phosphatase PPAPDC3. (292 aa)
	LOC106569881	Mothers against decapentaplegic homolog. (589 aa)
	LOC106587622	F-box only protein 22-like. (387 aa)
	p38b	Mitogen-activated protein kinase. (361 aa)
	maml1	Mastermind-like protein 1 isoform X1. (1061 aa)
	LOC106566983	Mitogen-activated protein kinase. (361 aa)
	LOC106572761	Mitogen-activated protein kinase. (390 aa)
	LOC106569978	Glycogen synthase kinase-3 beta-like isoform X1; Belongs to the protein kinase superfamily. (443 aa)
	smad4	Mothers against decapentaplegic homolog. (510 aa)
	smyd1b	SET and MYND domain-containing protein 1 isoform X1. (497 aa)
	LOC106605446	Mothers against decapentaplegic homolog. (565 aa)
	p38b-2	Mitogen-activated protein kinase 14A-like. (361 aa)
	LOC100380652	Peptidase inhibitor 16; Belongs to the CRISP family. (349 aa)
	LOC106608700	Dickkopf-related protein 1-like. (244 aa)
	SMAD4	Mothers against decapentaplegic homolog. (552 aa)
	LOC106604571	Mastermind-like protein 1 isoform X1. (1033 aa)
	LOC106604305	Homeobox protein Nkx-2.5-like. (315 aa)
	Akap6	A-kinase anchoring protein 6. (1167 aa)
	myog	Myogenin. (254 aa)
	dkk1-2	Salmo salar Dickkopf-related protein 1 (dkk1), mRNA. (294 aa)
	LOC106577088	Dickkopf-related protein 1-like. (246 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CAV3-2	myog	ENSSSAP00000115215	ENSSSAP00000108084	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	Myogenin.	0.573
ENSSSAP00000023442	myog	ENSSSAP00000023442	ENSSSAP00000108084	annotation not available	Myogenin.	0.509
ENSSSAP00000086864	LOC106593572	ENSSSAP00000086864	ENSSSAP00000072329	X-box binding protein 1.	Uncharacterized protein LOC106593572 isoform X1.	0.420
ENSSSAP00000086864	mtor	ENSSSAP00000086864	ENSSSAP00000045512	X-box binding protein 1.	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.	0.420
GSK3B	GSK3B-2	ENSSSAP00000016193	ENSSSAP00000033980	Glycogen synthase kinase-3 beta-like; Belongs to the protein kinase superfamily.	Glycogen synthase kinase-3 beta isoform X1; Belongs to the protein kinase superfamily.	0.901
GSK3B	LOC106573310	ENSSSAP00000016193	ENSSSAP00000070909	Glycogen synthase kinase-3 beta-like; Belongs to the protein kinase superfamily.	LOW QUALITY PROTEIN: class E basic helix-loop-helix protein 41-like.	0.448
GSK3B	LOC106593572	ENSSSAP00000016193	ENSSSAP00000072329	Glycogen synthase kinase-3 beta-like; Belongs to the protein kinase superfamily.	Uncharacterized protein LOC106593572 isoform X1.	0.449
GSK3B	LOC106611121	ENSSSAP00000016193	ENSSSAP00000015516	Glycogen synthase kinase-3 beta-like; Belongs to the protein kinase superfamily.	Bone morphogenetic protein 4-like.	0.421
GSK3B	bhlh3	ENSSSAP00000016193	ENSSSAP00000038390	Glycogen synthase kinase-3 beta-like; Belongs to the protein kinase superfamily.	Class B basic helix-loop-helix protein 3.	0.448
GSK3B	bmp4	ENSSSAP00000016193	ENSSSAP00000052505	Glycogen synthase kinase-3 beta-like; Belongs to the protein kinase superfamily.	Bone morphogenetic protein 4 precursor.	0.421
GSK3B	mtor	ENSSSAP00000016193	ENSSSAP00000045512	Glycogen synthase kinase-3 beta-like; Belongs to the protein kinase superfamily.	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.	0.449
GSK3B-2	GSK3B	ENSSSAP00000033980	ENSSSAP00000016193	Glycogen synthase kinase-3 beta isoform X1; Belongs to the protein kinase superfamily.	Glycogen synthase kinase-3 beta-like; Belongs to the protein kinase superfamily.	0.901
GSK3B-2	LOC106573310	ENSSSAP00000033980	ENSSSAP00000070909	Glycogen synthase kinase-3 beta isoform X1; Belongs to the protein kinase superfamily.	LOW QUALITY PROTEIN: class E basic helix-loop-helix protein 41-like.	0.448
GSK3B-2	LOC106593572	ENSSSAP00000033980	ENSSSAP00000072329	Glycogen synthase kinase-3 beta isoform X1; Belongs to the protein kinase superfamily.	Uncharacterized protein LOC106593572 isoform X1.	0.449
GSK3B-2	LOC106611121	ENSSSAP00000033980	ENSSSAP00000015516	Glycogen synthase kinase-3 beta isoform X1; Belongs to the protein kinase superfamily.	Bone morphogenetic protein 4-like.	0.421
GSK3B-2	bhlh3	ENSSSAP00000033980	ENSSSAP00000038390	Glycogen synthase kinase-3 beta isoform X1; Belongs to the protein kinase superfamily.	Class B basic helix-loop-helix protein 3.	0.448
GSK3B-2	bmp4	ENSSSAP00000033980	ENSSSAP00000052505	Glycogen synthase kinase-3 beta isoform X1; Belongs to the protein kinase superfamily.	Bone morphogenetic protein 4 precursor.	0.421
GSK3B-2	mtor	ENSSSAP00000033980	ENSSSAP00000045512	Glycogen synthase kinase-3 beta isoform X1; Belongs to the protein kinase superfamily.	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.	0.449
GSK3B-3	LOC106573310	ENSSSAP00000038573	ENSSSAP00000070909	Glycogen synthase kinase-3 beta-like isoform X4; Belongs to the protein kinase superfamily.	LOW QUALITY PROTEIN: class E basic helix-loop-helix protein 41-like.	0.448
GSK3B-3	LOC106593572	ENSSSAP00000038573	ENSSSAP00000072329	Glycogen synthase kinase-3 beta-like isoform X4; Belongs to the protein kinase superfamily.	Uncharacterized protein LOC106593572 isoform X1.	0.449