18 items (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	MYOC	Myocilin-like. (456 aa)
	LOC106585461	P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel. Belongs to the P2X receptor family. (610 aa)
	LOC106569913	Protein AF1q-like. (187 aa)
	gsh0	Glutamate--cysteine ligase regulatory subunit. (274 aa)
	ENSSSAP00000068135	annotation not available (83 aa)
	LOC106599954	Myocilin-like. (249 aa)
	Pgs2	Decorin. (218 aa)
	LOC106612605	Glutamate--cysteine ligase catalytic subunit-like isoform X2. (639 aa)
	LOC106613697	Hematopoietic SH2 domain-containing protein homolog. (418 aa)
	lrrk2	Leucine-rich repeat serine/threonine-protein kinase 2 isoform X2. (2564 aa)
	ENSSSAP00000024615	annotation not available (148 aa)
	LOC106588347	Protein AF1q-like. (88 aa)
	myoc	Myocilin. (476 aa)
	LOC106613972	Myocilin-like isoform X1. (473 aa)
	LOC100136494	Decorin; May affect the rate of fibrils formation. (364 aa)
	LOC106584335	Glutamate--cysteine ligase regulatory subunit-like. (273 aa)
	gsh1	Glutamate--cysteine ligase catalytic subunit isoform X1. (640 aa)
	LOC106579964	P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel. Belongs to the P2X receptor family. (569 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC100136494	Pgs2	ENSSSAP00000058272	ENSSSAP00000060370	Decorin; May affect the rate of fibrils formation.	Decorin.	0.901
LOC106584335	LOC106612605	ENSSSAP00000117984	ENSSSAP00000014520	Glutamate--cysteine ligase regulatory subunit-like.	Glutamate--cysteine ligase catalytic subunit-like isoform X2.	0.999
LOC106584335	gsh0	ENSSSAP00000117984	ENSSSAP00000071966	Glutamate--cysteine ligase regulatory subunit-like.	Glutamate--cysteine ligase regulatory subunit.	0.900
LOC106584335	gsh1	ENSSSAP00000117984	ENSSSAP00000114202	Glutamate--cysteine ligase regulatory subunit-like.	Glutamate--cysteine ligase catalytic subunit isoform X1.	0.999
LOC106612605	LOC106584335	ENSSSAP00000014520	ENSSSAP00000117984	Glutamate--cysteine ligase catalytic subunit-like isoform X2.	Glutamate--cysteine ligase regulatory subunit-like.	0.999
LOC106612605	gsh0	ENSSSAP00000014520	ENSSSAP00000071966	Glutamate--cysteine ligase catalytic subunit-like isoform X2.	Glutamate--cysteine ligase regulatory subunit.	0.999
LOC106612605	gsh1	ENSSSAP00000014520	ENSSSAP00000114202	Glutamate--cysteine ligase catalytic subunit-like isoform X2.	Glutamate--cysteine ligase catalytic subunit isoform X1.	0.900
Pgs2	LOC100136494	ENSSSAP00000060370	ENSSSAP00000058272	Decorin.	Decorin; May affect the rate of fibrils formation.	0.901
gsh0	LOC106584335	ENSSSAP00000071966	ENSSSAP00000117984	Glutamate--cysteine ligase regulatory subunit.	Glutamate--cysteine ligase regulatory subunit-like.	0.900
gsh0	LOC106612605	ENSSSAP00000071966	ENSSSAP00000014520	Glutamate--cysteine ligase regulatory subunit.	Glutamate--cysteine ligase catalytic subunit-like isoform X2.	0.999
gsh0	gsh1	ENSSSAP00000071966	ENSSSAP00000114202	Glutamate--cysteine ligase regulatory subunit.	Glutamate--cysteine ligase catalytic subunit isoform X1.	0.999
gsh1	LOC106584335	ENSSSAP00000114202	ENSSSAP00000117984	Glutamate--cysteine ligase catalytic subunit isoform X1.	Glutamate--cysteine ligase regulatory subunit-like.	0.999
gsh1	LOC106612605	ENSSSAP00000114202	ENSSSAP00000014520	Glutamate--cysteine ligase catalytic subunit isoform X1.	Glutamate--cysteine ligase catalytic subunit-like isoform X2.	0.900
gsh1	gsh0	ENSSSAP00000114202	ENSSSAP00000071966	Glutamate--cysteine ligase catalytic subunit isoform X1.	Glutamate--cysteine ligase regulatory subunit.	0.999