26 items (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106582903	Extracellular sulfatase. (884 aa)
	LOC106583032	Leucine-rich repeats and immunoglobulin-like domains protein 1 isoform X1. (1011 aa)
	LOC106585175	RING finger protein 165-like isoform X1. (353 aa)
	LOC106589028	Uncharacterized protein LOC106589028. (275 aa)
	LOC106590606	Chondrolectin-like isoform X2. (330 aa)
	LOC106562926	RING finger protein 165-like isoform X2. (354 aa)
	LOC106572085	Extracellular sulfatase. (1084 aa)
	LOC106575278	SLIT and NTRK-like protein 6 isoform X1. (870 aa)
	LOC106576823	Proto-oncogene tyrosine-protein kinase receptor Ret; Receptor tyrosine-protein kinase involved in numerous cellular mechanisms including cell proliferation, neuronal navigation, cell migration, and cell differentiation upon binding with glial cell derived neurotrophic factor family ligands. (1112 aa)
	gdn	Glia-derived nexin isoform X1; Belongs to the serpin family. (400 aa)
	LOC106578473	F-box/SPRY domain-containing protein 1-like isoform X2. (286 aa)
	LOC106578207	Endothelin-1 receptor-like. (222 aa)
	LOC106579714	Extracellular sulfatase Sulf-1-like. (793 aa)
	LOC106570392	Endothelin-1-like. (203 aa)
	ENSSSAP00000012992	Ret proto-oncogene receptor tyrosine kinase. (1109 aa)
	LOC106565789	Extracellular sulfatase. (884 aa)
	rnf165	RING finger protein 165 isoform X1. (346 aa)
	LOC106590630	F-box/SPRY domain-containing protein 1 isoform X2. (286 aa)
	LOC106574417	SLIT and NTRK-like protein 6. (874 aa)
	LOC106566486	Extracellular sulfatase Sulf-2-like. (978 aa)
	sulf1	Extracellular sulfatase Sulf-1 isoform X2. (1369 aa)
	LOC106580569	RING finger protein 165-like isoform X2. (353 aa)
	LOC106610223	Endothelin B receptor-like; Belongs to the G-protein coupled receptor 1 family. (481 aa)
	LOC100196662	Glia-derived nexin. (401 aa)
	LOC106565931	Leucine-rich repeats and immunoglobulin-like domains protein 1. (1044 aa)
	LOC106578443	Chondrolectin-like isoform X1. (321 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSSAP00000012992	LOC106565931	ENSSSAP00000012992	ENSSSAP00000111883	Ret proto-oncogene receptor tyrosine kinase.	Leucine-rich repeats and immunoglobulin-like domains protein 1.	0.488
ENSSSAP00000012992	LOC106583032	ENSSSAP00000012992	ENSSSAP00000079013	Ret proto-oncogene receptor tyrosine kinase.	Leucine-rich repeats and immunoglobulin-like domains protein 1 isoform X1.	0.488
LOC106565931	ENSSSAP00000012992	ENSSSAP00000111883	ENSSSAP00000012992	Leucine-rich repeats and immunoglobulin-like domains protein 1.	Ret proto-oncogene receptor tyrosine kinase.	0.488
LOC106565931	LOC106576823	ENSSSAP00000111883	ENSSSAP00000046991	Leucine-rich repeats and immunoglobulin-like domains protein 1.	Proto-oncogene tyrosine-protein kinase receptor Ret; Receptor tyrosine-protein kinase involved in numerous cellular mechanisms including cell proliferation, neuronal navigation, cell migration, and cell differentiation upon binding with glial cell derived neurotrophic factor family ligands.	0.488
LOC106570392	LOC106578207	ENSSSAP00000019078	ENSSSAP00000041268	Endothelin-1-like.	Endothelin-1 receptor-like.	0.985
LOC106570392	LOC106589028	ENSSSAP00000019078	ENSSSAP00000076828	Endothelin-1-like.	Uncharacterized protein LOC106589028.	0.900
LOC106570392	LOC106610223	ENSSSAP00000019078	ENSSSAP00000104145	Endothelin-1-like.	Endothelin B receptor-like; Belongs to the G-protein coupled receptor 1 family.	0.998
LOC106576823	LOC106565931	ENSSSAP00000046991	ENSSSAP00000111883	Proto-oncogene tyrosine-protein kinase receptor Ret; Receptor tyrosine-protein kinase involved in numerous cellular mechanisms including cell proliferation, neuronal navigation, cell migration, and cell differentiation upon binding with glial cell derived neurotrophic factor family ligands.	Leucine-rich repeats and immunoglobulin-like domains protein 1.	0.488
LOC106576823	LOC106583032	ENSSSAP00000046991	ENSSSAP00000079013	Proto-oncogene tyrosine-protein kinase receptor Ret; Receptor tyrosine-protein kinase involved in numerous cellular mechanisms including cell proliferation, neuronal navigation, cell migration, and cell differentiation upon binding with glial cell derived neurotrophic factor family ligands.	Leucine-rich repeats and immunoglobulin-like domains protein 1 isoform X1.	0.488
LOC106578207	LOC106570392	ENSSSAP00000041268	ENSSSAP00000019078	Endothelin-1 receptor-like.	Endothelin-1-like.	0.985
LOC106578207	LOC106589028	ENSSSAP00000041268	ENSSSAP00000076828	Endothelin-1 receptor-like.	Uncharacterized protein LOC106589028.	0.985
LOC106583032	ENSSSAP00000012992	ENSSSAP00000079013	ENSSSAP00000012992	Leucine-rich repeats and immunoglobulin-like domains protein 1 isoform X1.	Ret proto-oncogene receptor tyrosine kinase.	0.488
LOC106583032	LOC106576823	ENSSSAP00000079013	ENSSSAP00000046991	Leucine-rich repeats and immunoglobulin-like domains protein 1 isoform X1.	Proto-oncogene tyrosine-protein kinase receptor Ret; Receptor tyrosine-protein kinase involved in numerous cellular mechanisms including cell proliferation, neuronal navigation, cell migration, and cell differentiation upon binding with glial cell derived neurotrophic factor family ligands.	0.488
LOC106589028	LOC106570392	ENSSSAP00000076828	ENSSSAP00000019078	Uncharacterized protein LOC106589028.	Endothelin-1-like.	0.900
LOC106589028	LOC106578207	ENSSSAP00000076828	ENSSSAP00000041268	Uncharacterized protein LOC106589028.	Endothelin-1 receptor-like.	0.985
LOC106589028	LOC106610223	ENSSSAP00000076828	ENSSSAP00000104145	Uncharacterized protein LOC106589028.	Endothelin B receptor-like; Belongs to the G-protein coupled receptor 1 family.	0.998
LOC106610223	LOC106570392	ENSSSAP00000104145	ENSSSAP00000019078	Endothelin B receptor-like; Belongs to the G-protein coupled receptor 1 family.	Endothelin-1-like.	0.998
LOC106610223	LOC106589028	ENSSSAP00000104145	ENSSSAP00000076828	Endothelin B receptor-like; Belongs to the G-protein coupled receptor 1 family.	Uncharacterized protein LOC106589028.	0.998