37 items (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC100136517	Insulin-like growth factor I isoform X1. (198 aa)
	LOC106585964	Homeobox protein Meis1-like. (410 aa)
	larp7	La-related protein 7. (587 aa)
	parp2	Poly [ADP-ribose] polymerase. (658 aa)
	ENSSSAP00000016582	annotation not available (397 aa)
	LOC106570222	RNA polymerase II subunit A C-terminal domain phosphatase-like isoform X1. (1043 aa)
	tomm70a	Mitochondrial import receptor subunit TOM70. (614 aa)
	LOC106570392	Endothelin-1-like. (203 aa)
	LOC106571907	Transcription cofactor vestigial-like protein 4 isoform X2. (263 aa)
	LOC106588593	RNA polymerase II subunit A C-terminal domain phosphatase-like isoform X1. (1037 aa)
	ENSSSAP00000029131	Zinc finger protein, FOG family member 2a. (988 aa)
	ENSSSAP00000032270	annotation not available (150 aa)
	ENSSSAP00000032324	annotation not available (111 aa)
	ruvb1	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (456 aa)
	LOC106566756	Transcription cofactor vestigial-like protein 4 isoform X2. (263 aa)
	LOC106581161	T-box transcription factor TBX20-like isoform X3. (441 aa)
	LOC106609475	Insulin-like growth factor I isoform X1. (211 aa)
	vgll4	Transcription cofactor vestigial-like protein 4. (302 aa)
	LOC106612166	Homeobox protein Nkx-2.5-like. (315 aa)
	ruvbl2	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (511 aa)
	LOC106611457	Protein salvador homolog 1-like. (417 aa)
	LOC106605482	Zinc finger protein ZFPM2-like. (1039 aa)
	LOC106572096	Peptidase inhibitor 16-like; Belongs to the CRISP family. (336 aa)
	sav1	Protein salvador homolog 1 isoform X1. (423 aa)
	cav3	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (154 aa)
	TBX20	T-box transcription factor TBX20 isoform X3. (441 aa)
	LOC106582740	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (383 aa)
	LOC106566047	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (389 aa)
	LOC106589028	Uncharacterized protein LOC106589028. (275 aa)
	LOC106583210	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (456 aa)
	LOC106564847	Homeobox protein Meis1-like isoform X1. (444 aa)
	AKAP6	A-kinase anchor protein 6. (2315 aa)
	LOC100380652	Peptidase inhibitor 16; Belongs to the CRISP family. (349 aa)
	LOC106604305	Homeobox protein Nkx-2.5-like. (315 aa)
	Akap6	A-kinase anchoring protein 6. (1167 aa)
	LOC106588221	Zinc finger protein ZFPM2-like isoform X1. (1084 aa)
	CAV3-2	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (154 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC106566756	LOC106611457	ENSSSAP00000038487	ENSSSAP00000049368	Transcription cofactor vestigial-like protein 4 isoform X2.	Protein salvador homolog 1-like.	0.555
LOC106566756	sav1	ENSSSAP00000038487	ENSSSAP00000056019	Transcription cofactor vestigial-like protein 4 isoform X2.	Protein salvador homolog 1 isoform X1.	0.555
LOC106570222	tomm70a	ENSSSAP00000017403	ENSSSAP00000018247	RNA polymerase II subunit A C-terminal domain phosphatase-like isoform X1.	Mitochondrial import receptor subunit TOM70.	0.449
LOC106570392	LOC106589028	ENSSSAP00000019078	ENSSSAP00000076828	Endothelin-1-like.	Uncharacterized protein LOC106589028.	0.900
LOC106571907	LOC106611457	ENSSSAP00000027769	ENSSSAP00000049368	Transcription cofactor vestigial-like protein 4 isoform X2.	Protein salvador homolog 1-like.	0.422
LOC106571907	sav1	ENSSSAP00000027769	ENSSSAP00000056019	Transcription cofactor vestigial-like protein 4 isoform X2.	Protein salvador homolog 1 isoform X1.	0.422
LOC106581161	LOC106604305	ENSSSAP00000038593	ENSSSAP00000106523	T-box transcription factor TBX20-like isoform X3.	Homeobox protein Nkx-2.5-like.	0.682
LOC106581161	LOC106612166	ENSSSAP00000038593	ENSSSAP00000042232	T-box transcription factor TBX20-like isoform X3.	Homeobox protein Nkx-2.5-like.	0.682
LOC106583210	parp2	ENSSSAP00000084297	ENSSSAP00000011831	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.	Poly [ADP-ribose] polymerase.	0.442
LOC106583210	ruvb1	ENSSSAP00000084297	ENSSSAP00000038358	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.	0.900
LOC106583210	ruvbl2	ENSSSAP00000084297	ENSSSAP00000044206	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.	0.999
LOC106588593	tomm70a	ENSSSAP00000027895	ENSSSAP00000018247	RNA polymerase II subunit A C-terminal domain phosphatase-like isoform X1.	Mitochondrial import receptor subunit TOM70.	0.449
LOC106589028	LOC106570392	ENSSSAP00000076828	ENSSSAP00000019078	Uncharacterized protein LOC106589028.	Endothelin-1-like.	0.900
LOC106604305	LOC106581161	ENSSSAP00000106523	ENSSSAP00000038593	Homeobox protein Nkx-2.5-like.	T-box transcription factor TBX20-like isoform X3.	0.682
LOC106604305	TBX20	ENSSSAP00000106523	ENSSSAP00000061635	Homeobox protein Nkx-2.5-like.	T-box transcription factor TBX20 isoform X3.	0.682
LOC106611457	LOC106566756	ENSSSAP00000049368	ENSSSAP00000038487	Protein salvador homolog 1-like.	Transcription cofactor vestigial-like protein 4 isoform X2.	0.555
LOC106611457	LOC106571907	ENSSSAP00000049368	ENSSSAP00000027769	Protein salvador homolog 1-like.	Transcription cofactor vestigial-like protein 4 isoform X2.	0.422
LOC106611457	vgll4	ENSSSAP00000049368	ENSSSAP00000040870	Protein salvador homolog 1-like.	Transcription cofactor vestigial-like protein 4.	0.555
LOC106612166	LOC106581161	ENSSSAP00000042232	ENSSSAP00000038593	Homeobox protein Nkx-2.5-like.	T-box transcription factor TBX20-like isoform X3.	0.682
LOC106612166	TBX20	ENSSSAP00000042232	ENSSSAP00000061635	Homeobox protein Nkx-2.5-like.	T-box transcription factor TBX20 isoform X3.	0.682