14 items (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106585357-2	Transmembrane protein 2-like. (1409 aa)
	LOC106609185	Leucine-rich repeat transmembrane protein FLRT3-like. (655 aa)
	LOC106607212	Sphingosine 1-phosphate receptor 2-like; Belongs to the G-protein coupled receptor 1 family. (373 aa)
	LOC106570392	Endothelin-1-like. (203 aa)
	LOC106601285	Sphingosine 1-phosphate receptor 2-like; Belongs to the G-protein coupled receptor 1 family. (373 aa)
	LOC106578207	Endothelin-1 receptor-like. (222 aa)
	LOC106573785	Uncharacterized protein LOC106573785. (279 aa)
	LOC106605015	Vascular endothelial growth factor A-A-like isoform X1; Belongs to the PDGF/VEGF growth factor family. (190 aa)
	LOC106589028	Uncharacterized protein LOC106589028. (275 aa)
	LOC106584182	Vascular endothelial growth factor A-A isoform X1; Belongs to the PDGF/VEGF growth factor family. (190 aa)
	LOC106580058	Transmembrane protein 2-like. (1408 aa)
	LOC106585357	Transmembrane protein 2-like. (1409 aa)
	LOC106610223	Endothelin B receptor-like; Belongs to the G-protein coupled receptor 1 family. (481 aa)
	LOC106589919	Leucine-rich repeat transmembrane protein FLRT3-like. (654 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC106570392	LOC106578207	ENSSSAP00000019078	ENSSSAP00000041268	Endothelin-1-like.	Endothelin-1 receptor-like.	0.985
LOC106570392	LOC106589028	ENSSSAP00000019078	ENSSSAP00000076828	Endothelin-1-like.	Uncharacterized protein LOC106589028.	0.900
LOC106570392	LOC106610223	ENSSSAP00000019078	ENSSSAP00000104145	Endothelin-1-like.	Endothelin B receptor-like; Belongs to the G-protein coupled receptor 1 family.	0.998
LOC106578207	LOC106570392	ENSSSAP00000041268	ENSSSAP00000019078	Endothelin-1 receptor-like.	Endothelin-1-like.	0.985
LOC106578207	LOC106589028	ENSSSAP00000041268	ENSSSAP00000076828	Endothelin-1 receptor-like.	Uncharacterized protein LOC106589028.	0.985
LOC106584182	LOC106605015	ENSSSAP00000083654	ENSSSAP00000074586	Vascular endothelial growth factor A-A isoform X1; Belongs to the PDGF/VEGF growth factor family.	Vascular endothelial growth factor A-A-like isoform X1; Belongs to the PDGF/VEGF growth factor family.	0.900
LOC106589028	LOC106570392	ENSSSAP00000076828	ENSSSAP00000019078	Uncharacterized protein LOC106589028.	Endothelin-1-like.	0.900
LOC106589028	LOC106578207	ENSSSAP00000076828	ENSSSAP00000041268	Uncharacterized protein LOC106589028.	Endothelin-1 receptor-like.	0.985
LOC106589028	LOC106610223	ENSSSAP00000076828	ENSSSAP00000104145	Uncharacterized protein LOC106589028.	Endothelin B receptor-like; Belongs to the G-protein coupled receptor 1 family.	0.998
LOC106605015	LOC106584182	ENSSSAP00000074586	ENSSSAP00000083654	Vascular endothelial growth factor A-A-like isoform X1; Belongs to the PDGF/VEGF growth factor family.	Vascular endothelial growth factor A-A isoform X1; Belongs to the PDGF/VEGF growth factor family.	0.900
LOC106610223	LOC106570392	ENSSSAP00000104145	ENSSSAP00000019078	Endothelin B receptor-like; Belongs to the G-protein coupled receptor 1 family.	Endothelin-1-like.	0.998
LOC106610223	LOC106589028	ENSSSAP00000104145	ENSSSAP00000076828	Endothelin B receptor-like; Belongs to the G-protein coupled receptor 1 family.	Uncharacterized protein LOC106589028.	0.998