59 items (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106607615	Protein FAM149B1-like isoform X5. (761 aa)
	tm107	Transmembrane protein 107-like isoform X1. (149 aa)
	LOC106575900	ADP-ribosylation factor-like protein 13B; Belongs to the small GTPase superfamily. Arf family. (179 aa)
	ENSSSAP00000012966	annotation not available (53 aa)
	LOC106579062	Tectonic-3-like isoform X1. (653 aa)
	ift122	Intraflagellar transport protein 122 homolog isoform X2. (1231 aa)
	lrrc6	Protein tilB homolog isoform X1. (458 aa)
	LOC106564478	BBSome-interacting protein 1. (66 aa)
	LOC106567675	Rab GTPase-binding effector protein 1-like isoform X1. (859 aa)
	LOC106576421	Tubby-like protein; Belongs to the TUB family. (508 aa)
	LOC106611158	Spermatogenesis-associated protein 7 homolog. (518 aa)
	LOC106610600	Uncharacterized protein C2orf71-like. (1148 aa)
	LOC106609502	Tubby-like protein; Belongs to the TUB family. (668 aa)
	LOC106590145	BBSome-interacting protein 1-like. (67 aa)
	ENSSSAP00000025797	annotation not available (97 aa)
	LOC106607033	Intraflagellar transport protein 56-like isoform X1. (582 aa)
	bbs9	Protein PTHB1 isoform X1. (1006 aa)
	LOC106608215	ATPase H+ transporting V1 subunit D. (248 aa)
	LOC106574226	Transmembrane protein 107-like. (153 aa)
	LOC106612080	RDS/peripherin-like protein xRDS35. (350 aa)
	cfap58	Cilia- and flagella-associated protein 58. (882 aa)
	fam149b1	Protein FAM149B1 isoform X2. (691 aa)
	ENSSSAP00000056455	annotation not available (204 aa)
	LOC106579379	Tubby-related protein 3-like isoform X2; Belongs to the TUB family. (557 aa)
	LOC106594530	ADP-ribosylation factor-like protein 6; Belongs to the small GTPase superfamily. Arf family. (136 aa)
	ENSSSAP00000058739	Bardet-Biedl syndrome 4 protein-like. (136 aa)
	LOC106586542	ADP-ribosylation factor-like protein 6 isoform X6; Belongs to the small GTPase superfamily. Arf family. (176 aa)
	TUB	Tubby-like protein; Belongs to the TUB family. (502 aa)
	ENSSSAP00000061924	annotation not available (425 aa)
	ENSSSAP00000061927	annotation not available (455 aa)
	LOC106613363	Intraflagellar transport protein 20 homolog. (132 aa)
	ift20	Intraflagellar transport protein 20 homolog. (132 aa)
	ift140	Intraflagellar transport protein 140 homolog isoform X2. (1460 aa)
	LOC106560769	Bardet-Biedl syndrome 4 protein-like isoform X1. (526 aa)
	tctn1	Tectonic-1 isoform X1. (662 aa)
	LOC106603450	Rab GTPase-binding effector protein 1-like isoform X2. (998 aa)
	LOC106604375	RDS/peripherin-like protein xRDS35. (347 aa)
	ENSSSAP00000077864	annotation not available (173 aa)
	BBS4	Bardet-Biedl syndrome 4 protein-like. (523 aa)
	LOC106590692	Tetratricopeptide repeat protein 21B-like. (1133 aa)
	ARL6	ADP-ribosylation factor-like protein 6 isoform X1; Belongs to the small GTPase superfamily. Arf family. (241 aa)
	ENSSSAP00000081978	annotation not available (530 aa)
	LOC106586973	Intraflagellar transport protein 56-like isoform X1. (588 aa)
	LOC106571673	V-type proton ATPase subunit D. (248 aa)
	cc2d2a	Coiled-coil and C2 domain-containing protein 2A isoform X1. (1683 aa)
	LOC106593292	WD repeat-containing protein 19-like. (122 aa)
	LOC106587536	Tubby-like protein; Belongs to the TUB family. (496 aa)
	pcare	Uncharacterized protein C2orf71 homolog. (1162 aa)
	LOC106566029	Tubby-related protein 1-like; Belongs to the TUB family. (328 aa)
	LOC106581727	Ropporin-1-like. (295 aa)
	ENSSSAP00000091709	Tetratricopeptide repeat domain 26. (571 aa)
	wdr35	WD repeat-containing protein 35. (1183 aa)
	fam149a	Protein FAM149A isoform X1. (685 aa)
	ift80	LOW QUALITY PROTEIN: intraflagellar transport protein 80 homolog. (791 aa)
	NPHP4	Nephrocystin-4 isoform X3. (1458 aa)
	LOC106571640	Uncharacterized protein C2orf71 homolog. (871 aa)
	LOC106582603	Tubby-related protein 1-like; Belongs to the TUB family. (331 aa)
	ttc21b	Tetratricopeptide repeat protein 21B. (1326 aa)
	LOC106575312	Zinc finger protein Dzip1-like isoform X3. (477 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARL6	BBS4	ENSSSAP00000081011	ENSSSAP00000079394	ADP-ribosylation factor-like protein 6 isoform X1; Belongs to the small GTPase superfamily. Arf family.	Bardet-Biedl syndrome 4 protein-like.	0.547
ARL6	ENSSSAP00000056455	ENSSSAP00000081011	ENSSSAP00000056455	ADP-ribosylation factor-like protein 6 isoform X1; Belongs to the small GTPase superfamily. Arf family.	annotation not available	0.547
ARL6	ENSSSAP00000058739	ENSSSAP00000081011	ENSSSAP00000058739	ADP-ribosylation factor-like protein 6 isoform X1; Belongs to the small GTPase superfamily. Arf family.	Bardet-Biedl syndrome 4 protein-like.	0.547
ARL6	ENSSSAP00000061924	ENSSSAP00000081011	ENSSSAP00000061924	ADP-ribosylation factor-like protein 6 isoform X1; Belongs to the small GTPase superfamily. Arf family.	annotation not available	0.585
ARL6	ENSSSAP00000061927	ENSSSAP00000081011	ENSSSAP00000061927	ADP-ribosylation factor-like protein 6 isoform X1; Belongs to the small GTPase superfamily. Arf family.	annotation not available	0.585
ARL6	LOC106560769	ENSSSAP00000081011	ENSSSAP00000072655	ADP-ribosylation factor-like protein 6 isoform X1; Belongs to the small GTPase superfamily. Arf family.	Bardet-Biedl syndrome 4 protein-like isoform X1.	0.547
ARL6	bbs9	ENSSSAP00000081011	ENSSSAP00000036471	ADP-ribosylation factor-like protein 6 isoform X1; Belongs to the small GTPase superfamily. Arf family.	Protein PTHB1 isoform X1.	0.585
BBS4	ARL6	ENSSSAP00000079394	ENSSSAP00000081011	Bardet-Biedl syndrome 4 protein-like.	ADP-ribosylation factor-like protein 6 isoform X1; Belongs to the small GTPase superfamily. Arf family.	0.547
BBS4	ENSSSAP00000061924	ENSSSAP00000079394	ENSSSAP00000061924	Bardet-Biedl syndrome 4 protein-like.	annotation not available	0.953
BBS4	ENSSSAP00000061927	ENSSSAP00000079394	ENSSSAP00000061927	Bardet-Biedl syndrome 4 protein-like.	annotation not available	0.953
BBS4	ENSSSAP00000081978	ENSSSAP00000079394	ENSSSAP00000081978	Bardet-Biedl syndrome 4 protein-like.	annotation not available	0.566
BBS4	ENSSSAP00000091709	ENSSSAP00000079394	ENSSSAP00000091709	Bardet-Biedl syndrome 4 protein-like.	Tetratricopeptide repeat domain 26.	0.566
BBS4	LOC106564478	ENSSSAP00000079394	ENSSSAP00000015032	Bardet-Biedl syndrome 4 protein-like.	BBSome-interacting protein 1.	0.599
BBS4	LOC106586542	ENSSSAP00000079394	ENSSSAP00000058994	Bardet-Biedl syndrome 4 protein-like.	ADP-ribosylation factor-like protein 6 isoform X6; Belongs to the small GTPase superfamily. Arf family.	0.547
BBS4	LOC106586973	ENSSSAP00000079394	ENSSSAP00000082088	Bardet-Biedl syndrome 4 protein-like.	Intraflagellar transport protein 56-like isoform X1.	0.566
BBS4	LOC106590145	ENSSSAP00000079394	ENSSSAP00000022012	Bardet-Biedl syndrome 4 protein-like.	BBSome-interacting protein 1-like.	0.883
BBS4	LOC106590692	ENSSSAP00000079394	ENSSSAP00000079935	Bardet-Biedl syndrome 4 protein-like.	Tetratricopeptide repeat protein 21B-like.	0.423
BBS4	LOC106593292	ENSSSAP00000079394	ENSSSAP00000083500	Bardet-Biedl syndrome 4 protein-like.	WD repeat-containing protein 19-like.	0.456
BBS4	LOC106594530	ENSSSAP00000079394	ENSSSAP00000057681	Bardet-Biedl syndrome 4 protein-like.	ADP-ribosylation factor-like protein 6; Belongs to the small GTPase superfamily. Arf family.	0.547
BBS4	LOC106607033	ENSSSAP00000079394	ENSSSAP00000033459	Bardet-Biedl syndrome 4 protein-like.	Intraflagellar transport protein 56-like isoform X1.	0.566