STRINGSTRING
LOC106598694 LOC106598694 yod1 yod1 otub1 otub1 LOC106587341 LOC106587341 LOC106599449 LOC106599449 ENSSSAP00000110122 ENSSSAP00000110122 LOC106583425 LOC106583425 LOC106586134 LOC106586134 pim1 pim1 mindy2 mindy2 LOC106581836 LOC106581836 tnfaip3 tnfaip3 LOC106580658 LOC106580658 vcpip1 vcpip1 LOC106569905 LOC106569905 USP34-2 USP34-2 LOC106583439 LOC106583439 LOC106569850 LOC106569850 LOC106591177 LOC106591177 LOC106565882 LOC106565882 LOC106593997 LOC106593997 ENSSSAP00000063355 ENSSSAP00000063355 LOC106562719 LOC106562719 ENSSSAP00000061342 ENSSSAP00000061342 LOC106571839 LOC106571839 LOC106596347 LOC106596347 otud3 otud3 usp37 usp37 mindy4 mindy4 ENSSSAP00000038201 ENSSSAP00000038201 LOC106580009 LOC106580009 LOC106565169 LOC106565169 ubp5 ubp5 LOC106588341 LOC106588341 LOC106566853 LOC106566853 LOC106569751 LOC106569751 OTUD7A OTUD7A LOC106592072 LOC106592072 otub2 otub2 LOC106605289 LOC106605289 LOC106605428 LOC106605428 LOC106606244 LOC106606244 LOC106608596 LOC106608596 usp7 usp7 USP34 USP34 LOC106610821 LOC106610821
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC106598694Putative ubiquitin thioesterase otu1. (300 aa)
yod1Ubiquitin thioesterase OTU1. (317 aa)
otub1Methyltransferase-like protein 12, mitochondrial isoform X1. (493 aa)
LOC106587341Protein FAM63B-like isoform X1. (645 aa)
LOC106599449Deubiquitinating protein VCIP135-like. (1187 aa)
ENSSSAP00000110122annotation not available (396 aa)
LOC106583425Ubiquitin carboxyl-terminal hydrolase. (853 aa)
LOC106586134Ubiquitin carboxyl-terminal hydrolase. (951 aa)
pim1OTU domain-containing protein 5. (799 aa)
mindy2Protein FAM63B isoform X1. (655 aa)
LOC106581836OTU domain-containing protein 7B-like. (918 aa)
tnfaip3Tumor necrosis factor alpha-induced protein 3 isoform X2. (800 aa)
LOC106580658Protein FAM188B2 isoform X1. (347 aa)
vcpip1Deubiquitinating protein VCIP135. (1187 aa)
LOC106569905Protein FAM63A-like. (561 aa)
USP34-2Ubiquitin specific peptidase 34. (3458 aa)
LOC106583439Ubiquitin carboxyl-terminal hydrolase. (744 aa)
LOC106569850Ubiquitin carboxyl-terminal hydrolase. (963 aa)
LOC106591177Ubiquitin carboxyl-terminal hydrolase 7-like. (289 aa)
LOC106565882Ubiquitin thioesterase OTU1. (303 aa)
LOC106593997Ubiquitin carboxyl-terminal hydrolase 8-like. (136 aa)
ENSSSAP00000063355annotation not available (657 aa)
LOC106562719Ubiquitin carboxyl-terminal hydrolase. (956 aa)
ENSSSAP00000061342annotation not available (141 aa)
LOC106571839OTU domain-containing protein 5-A-like isoform X1. (549 aa)
LOC106596347Ubiquitin carboxyl-terminal hydrolase. (779 aa)
otud3OTU domain-containing protein 3. (357 aa)
usp37Ubiquitin carboxyl-terminal hydrolase. (947 aa)
mindy4Protein FAM188B isoform X1. (719 aa)
ENSSSAP00000038201Ubiquitin carboxyl-terminal hydrolase 8-like. (270 aa)
LOC106580009Protein FAM188A-like. (450 aa)
LOC106565169Ubiquitin carboxyl-terminal hydrolase. (737 aa)
ubp5Salmo salar Ubiquitin carboxyl-terminal hydrolase 5 (ubp5), mRNA. (846 aa)
LOC106588341Protein FAM63A-like. (553 aa)
LOC106566853OTU domain-containing protein 3-like. (406 aa)
LOC106569751Ubiquitin carboxyl-terminal hydrolase. (926 aa)
OTUD7AOTU domain-containing protein 7A-like. (1069 aa)
LOC106592072Ubiquitin carboxyl-terminal hydrolase 8-like; Belongs to the peptidase C19 family. (997 aa)
otub2Ubiquitin thioesterase OTUB2. (237 aa)
LOC106605289OTU domain-containing protein 7B-like. (928 aa)
LOC106605428Protein FAM188A-like. (450 aa)
LOC106606244Ubiquitin carboxyl-terminal hydrolase. (501 aa)
LOC106608596Ubiquitin thioesterase. (306 aa)
usp7Ubiquitin carboxyl-terminal hydrolase 7. (180 aa)
USP34Ubiquitin carboxyl-terminal hydrolase 34-like isoform X4; Belongs to the peptidase C19 family. (3674 aa)
LOC106610821Tumor necrosis factor alpha-induced protein 3-like. (752 aa)
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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