53 items (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RNF2	E3 ubiquitin-protein ligase RING2-like isoform X1. (223 aa)
	LOC106562981	set1/Ash2 histone methyltransferase complex subunit ASH2-like. (605 aa)
	prpf31	U4/U6 small nuclear ribonucleoprotein Prp31. (559 aa)
	LOC106565785	PHD finger protein 20-like isoform X4. (1044 aa)
	ENSSSAP00000018716	PRP31 pre-mRNA processing factor 31 homolog (yeast). (353 aa)
	LOC106608157	Protein max isoform X1. (221 aa)
	HCFC1	Host cell factor 1-like isoform X2. (1692 aa)
	LOC106569448	Chromodomain-helicase-DNA-binding protein 8; DNA helicase that acts as a chromatin remodeling factor and regulates transcription. Acts as a transcription repressor by remodeling chromatin structure and recruiting histone H1 to target genes. Suppresses p53/TP53-mediated apoptosis by recruiting histone H1 and preventing p53/TP53 transactivation activity. Acts as a negative regulator of Wnt signaling pathway by regulating beta-catenin (CTNNB1) activity. Negatively regulates CTNNB1-targeted gene expression by being recruited specifically to the promoter regions of several CTNNB1 responsive [...] (2582 aa)
	INO80C	INO80 complex subunit C. (139 aa)
	DPY30	Protein dpy-30 homolog isoform X2. (110 aa)
	tex10	Testis-expressed sequence 10 protein. (699 aa)
	LOC106608076	MAX gene-associated protein-like isoform X1. (1766 aa)
	ENSSSAP00000029284	annotation not available (176 aa)
	ENSSSAP00000029291	annotation not available (320 aa)
	LOC106567897	Chromatin complexes subunit BAP18-like. (204 aa)
	LOC106560681	Transcription initiation factor TFIID subunit 6-like. (689 aa)
	LOC106577888	Proline-, glutamic acid- and leucine-rich protein 1-like isoform X1. (1235 aa)
	cq049	Potential DNA-binding protein C17orf49 homolog. (200 aa)
	ruvb1	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (456 aa)
	LOC106602308	MAX gene-associated protein-like isoform X1. (2056 aa)
	ENSSSAP00000039340	annotation not available (358 aa)
	LOC106611077	Protein max-like isoform X4. (196 aa)
	LOC106586224	Protein dpy-30 homolog isoform X1. (104 aa)
	LOC106608591	Menin-like isoform X1. (620 aa)
	ruvbl2	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (511 aa)
	ENSSSAP00000044813	Host cell factor 1-like. (1425 aa)
	LOC106602816	Transcription initiation factor TFIID subunit 6-like. (644 aa)
	rng2a	E3 ubiquitin-protein ligase RING2-A. (387 aa)
	LOC106574865	INO80 complex subunit C-like. (215 aa)
	LOC106609287	Host cell factor 2-like isoform X1. (771 aa)
	LOC106564822	Protein dpy-30 homolog isoform X2. (104 aa)
	cssa04h17orf49	Chromatin complexes subunit BAP18. (204 aa)
	ENSSSAP00000060040	annotation not available (182 aa)
	LOC106566343	Host cell factor 1-like isoform X2. (1704 aa)
	LOC106572082	PHD finger protein 20-like. (1001 aa)
	mcrs1	Microspherule protein 1. (476 aa)
	LOC106608902	LOW QUALITY PROTEIN: proline-, glutamic acid- and leucine-rich protein 1-like. (1002 aa)
	LOC106608937	Chromatin complexes subunit BAP18-like isoform X3. (264 aa)
	LOC106600304	Chromodomain-helicase-DNA-binding protein 8; DNA helicase that acts as a chromatin remodeling factor and regulates transcription. Acts as a transcription repressor by remodeling chromatin structure and recruiting histone H1 to target genes. Suppresses p53/TP53-mediated apoptosis by recruiting histone H1 and preventing p53/TP53 transactivation activity. Acts as a negative regulator of Wnt signaling pathway by regulating beta-catenin (CTNNB1) activity. Negatively regulates CTNNB1-targeted gene expression by being recruited specifically to the promoter regions of several CTNNB1 responsive [...] (2573 aa)
	LOC106571563	MAX gene-associated protein-like isoform X2. (325 aa)
	LOC106583210	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (456 aa)
	ENSSSAP00000084433	Myc associated factor X. (265 aa)
	LOC106611247	Uncharacterized protein LOC106611247 isoform X1. (3409 aa)
	e2f6	Transcription factor E2F6 isoform X1. (388 aa)
	LOC106576181	Host cell factor 2-like. (773 aa)
	LOC100194676	set1/Ash2 histone methyltransferase complex subunit ASH2 isoform X2. (605 aa)
	RING1	E3 ubiquitin-protein ligase RING2-A-like isoform X2. (428 aa)
	LOC106577528	Menin-like. (621 aa)
	LOC106583489	Retinoblastoma-binding protein 5-like isoform X1. (554 aa)
	LOC106565113	Retinoblastoma-binding protein 5 isoform X1. (560 aa)
	LOC106583247	Microspherule protein 1-like. (470 aa)
	LOC106582878	Host cell factor 1-like isoform X2. (1662 aa)
	LOC106582901	PHD finger protein 20-like isoform X4. (1052 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DPY30	ENSSSAP00000044813	ENSSSAP00000027212	ENSSSAP00000044813	Protein dpy-30 homolog isoform X2.	Host cell factor 1-like.	0.458
DPY30	HCFC1	ENSSSAP00000027212	ENSSSAP00000020913	Protein dpy-30 homolog isoform X2.	Host cell factor 1-like isoform X2.	0.638
DPY30	LOC100194676	ENSSSAP00000027212	ENSSSAP00000108884	Protein dpy-30 homolog isoform X2.	set1/Ash2 histone methyltransferase complex subunit ASH2 isoform X2.	0.979
DPY30	LOC106562981	ENSSSAP00000027212	ENSSSAP00000009275	Protein dpy-30 homolog isoform X2.	set1/Ash2 histone methyltransferase complex subunit ASH2-like.	0.979
DPY30	LOC106565113	ENSSSAP00000027212	ENSSSAP00000119653	Protein dpy-30 homolog isoform X2.	Retinoblastoma-binding protein 5 isoform X1.	0.979
DPY30	LOC106566343	ENSSSAP00000027212	ENSSSAP00000061757	Protein dpy-30 homolog isoform X2.	Host cell factor 1-like isoform X2.	0.638
DPY30	LOC106567897	ENSSSAP00000027212	ENSSSAP00000031919	Protein dpy-30 homolog isoform X2.	Chromatin complexes subunit BAP18-like.	0.411
DPY30	LOC106576181	ENSSSAP00000027212	ENSSSAP00000096439	Protein dpy-30 homolog isoform X2.	Host cell factor 2-like.	0.458
DPY30	LOC106577528	ENSSSAP00000027212	ENSSSAP00000116640	Protein dpy-30 homolog isoform X2.	Menin-like.	0.470
DPY30	LOC106582878	ENSSSAP00000027212	ENSSSAP00000120038	Protein dpy-30 homolog isoform X2.	Host cell factor 1-like isoform X2.	0.638
DPY30	LOC106583489	ENSSSAP00000027212	ENSSSAP00000119400	Protein dpy-30 homolog isoform X2.	Retinoblastoma-binding protein 5-like isoform X1.	0.979
DPY30	LOC106608591	ENSSSAP00000027212	ENSSSAP00000042734	Protein dpy-30 homolog isoform X2.	Menin-like isoform X1.	0.470
DPY30	LOC106608937	ENSSSAP00000027212	ENSSSAP00000081104	Protein dpy-30 homolog isoform X2.	Chromatin complexes subunit BAP18-like isoform X3.	0.411
DPY30	LOC106609287	ENSSSAP00000027212	ENSSSAP00000050844	Protein dpy-30 homolog isoform X2.	Host cell factor 2-like isoform X1.	0.458
DPY30	cq049	ENSSSAP00000027212	ENSSSAP00000035641	Protein dpy-30 homolog isoform X2.	Potential DNA-binding protein C17orf49 homolog.	0.411
DPY30	cssa04h17orf49	ENSSSAP00000027212	ENSSSAP00000055228	Protein dpy-30 homolog isoform X2.	Chromatin complexes subunit BAP18.	0.411
ENSSSAP00000018716	LOC106583210	ENSSSAP00000018716	ENSSSAP00000084297	PRP31 pre-mRNA processing factor 31 homolog (yeast).	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.	0.654
ENSSSAP00000018716	ruvb1	ENSSSAP00000018716	ENSSSAP00000038358	PRP31 pre-mRNA processing factor 31 homolog (yeast).	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.	0.654
ENSSSAP00000018716	ruvbl2	ENSSSAP00000018716	ENSSSAP00000044206	PRP31 pre-mRNA processing factor 31 homolog (yeast).	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.	0.479
ENSSSAP00000029284	LOC100194676	ENSSSAP00000029284	ENSSSAP00000108884	annotation not available	set1/Ash2 histone methyltransferase complex subunit ASH2 isoform X2.	0.418