39 items (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106592746	Tumor necrosis factor ligand superfamily member 10-like; Belongs to the tumor necrosis factor family. (160 aa)
	LOC106561115	C-C motif chemokine. (101 aa)
	ENSSSAP00000010071	annotation not available (205 aa)
	rtn4ip1	C-C chemokine receptor type 6-like; Belongs to the G-protein coupled receptor 1 family. (462 aa)
	LOC106603721	Adapter molecule crk-like. (319 aa)
	LOC106586045	G-protein coupled receptor 183-like. (389 aa)
	GPR183	G-protein coupled receptor 183-like; Belongs to the G-protein coupled receptor 1 family. (407 aa)
	tbx21	T-box transcription factor TBX21 isoform X1. (612 aa)
	ebi2	G-protein coupled receptor 183; G-protein coupled receptor expressed in lymphocytes that acts as a chemotactic receptor for B-cells, T-cells, splenic dendritic cells, monocytes/macrophages and astrocytes (By similarity). Receptor for oxysterol 7-alpha,25-dihydroxycholesterol (7-alpha,25-OHC) and other related oxysterols (By similarity). Mediates cell positioning and movement of a number of cells by binding the 7-alpha,25-OHC ligand that forms a chemotactic gradient (By similarity). Binding of 7-alpha,25-OHC mediates the correct localization of B-cells during humoral immune responses (B [...] (366 aa)
	LOC106581630	G-protein coupled receptor 183-like; Belongs to the G-protein coupled receptor 1 family. (343 aa)
	LOC100136511	C-C motif chemokine. (101 aa)
	LOC106602867	Protein spinster homolog 2 isoform X1. (590 aa)
	LOC106567642	Cytotoxic and regulatory T-cell molecule-like isoform X2. (426 aa)
	LOC106600142	C-C motif chemokine 20-like. (113 aa)
	LOC106602884	Junctional adhesion molecule A-like. (296 aa)
	LOC106574798	Growth arrest-specific protein 6-like. (376 aa)
	crk	Adapter molecule crk. (306 aa)
	LOC106575960	G-protein coupled receptor 183-like isoform X2; Belongs to the G-protein coupled receptor 1 family. (320 aa)
	LOC106575202	CD99 antigen-like protein 2 isoform X2. (273 aa)
	gas6	Growth arrest-specific protein 6. (589 aa)
	ENSSSAP00000067827	annotation not available (265 aa)
	ENSSSAP00000076773	annotation not available (78 aa)
	LOC106560694	Junctional adhesion molecule A-like. (357 aa)
	LOC106589292	Eomesodermin-like isoform X1. (624 aa)
	LOC106612582	Vitamin K-dependent protein S-like isoform X1. (428 aa)
	crtam	Cytotoxic and regulatory T-cell molecule. (457 aa)
	LOC106569045	25-hydroxycholesterol 7-alpha-hydroxylase; Belongs to the cytochrome P450 family. (501 aa)
	LOC106572824	C-C chemokine receptor type 6-like; Belongs to the G-protein coupled receptor 1 family. (371 aa)
	LOC106580783	Adapter molecule crk-like. (308 aa)
	LOC106566436	Crk-like protein. (304 aa)
	ENSSSAP00000092551	Artemin-like. (126 aa)
	CCL19	C-C motif chemokine. (122 aa)
	LOC106570861	C-C motif chemokine. (124 aa)
	LOC106598943	Artemin-like. (285 aa)
	ccr6	C-C chemokine receptor type 6; Belongs to the G-protein coupled receptor 1 family. (392 aa)
	cd99	CD99 molecule isoform X1. (222 aa)
	CYP7B1	25-hydroxycholesterol 7-alpha-hydroxylase-like; Belongs to the cytochrome P450 family. (495 aa)
	CRK	Adapter molecule crk-like. (364 aa)
	LOC106563168	Crk-like protein. (331 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CCL19	ccr6	ENSSSAP00000092858	ENSSSAP00000106122	C-C motif chemokine.	C-C chemokine receptor type 6; Belongs to the G-protein coupled receptor 1 family.	0.526
CYP7B1	LOC106569045	ENSSSAP00000113831	ENSSSAP00000088240	25-hydroxycholesterol 7-alpha-hydroxylase-like; Belongs to the cytochrome P450 family.	25-hydroxycholesterol 7-alpha-hydroxylase; Belongs to the cytochrome P450 family.	0.900
ENSSSAP00000092551	LOC106598943	ENSSSAP00000092551	ENSSSAP00000102233	Artemin-like.	Artemin-like.	0.407
GPR183	LOC106569045	ENSSSAP00000019300	ENSSSAP00000088240	G-protein coupled receptor 183-like; Belongs to the G-protein coupled receptor 1 family.	25-hydroxycholesterol 7-alpha-hydroxylase; Belongs to the cytochrome P450 family.	0.590
LOC106560694	LOC106602884	ENSSSAP00000077885	ENSSSAP00000057570	Junctional adhesion molecule A-like.	Junctional adhesion molecule A-like.	0.901
LOC106561115	LOC106570861	ENSSSAP00000008019	ENSSSAP00000097109	C-C motif chemokine.	C-C motif chemokine.	0.408
LOC106569045	CYP7B1	ENSSSAP00000088240	ENSSSAP00000113831	25-hydroxycholesterol 7-alpha-hydroxylase; Belongs to the cytochrome P450 family.	25-hydroxycholesterol 7-alpha-hydroxylase-like; Belongs to the cytochrome P450 family.	0.900
LOC106569045	GPR183	ENSSSAP00000088240	ENSSSAP00000019300	25-hydroxycholesterol 7-alpha-hydroxylase; Belongs to the cytochrome P450 family.	G-protein coupled receptor 183-like; Belongs to the G-protein coupled receptor 1 family.	0.590
LOC106569045	ebi2	ENSSSAP00000088240	ENSSSAP00000036679	25-hydroxycholesterol 7-alpha-hydroxylase; Belongs to the cytochrome P450 family.	G-protein coupled receptor 183; G-protein coupled receptor expressed in lymphocytes that acts as a chemotactic receptor for B-cells, T-cells, splenic dendritic cells, monocytes/macrophages and astrocytes (By similarity). Receptor for oxysterol 7-alpha,25-dihydroxycholesterol (7-alpha,25-OHC) and other related oxysterols (By similarity). Mediates cell positioning and movement of a number of cells by binding the 7-alpha,25-OHC ligand that forms a chemotactic gradient (By similarity). Binding of 7-alpha,25-OHC mediates the correct localization of B-cells during humoral immune responses (B [...]	0.538
LOC106570861	LOC106561115	ENSSSAP00000097109	ENSSSAP00000008019	C-C motif chemokine.	C-C motif chemokine.	0.408
LOC106572824	LOC106600142	ENSSSAP00000088755	ENSSSAP00000051617	C-C chemokine receptor type 6-like; Belongs to the G-protein coupled receptor 1 family.	C-C motif chemokine 20-like.	0.957
LOC106572824	ccr6	ENSSSAP00000088755	ENSSSAP00000106122	C-C chemokine receptor type 6-like; Belongs to the G-protein coupled receptor 1 family.	C-C chemokine receptor type 6; Belongs to the G-protein coupled receptor 1 family.	0.901
LOC106572824	rtn4ip1	ENSSSAP00000088755	ENSSSAP00000015624	C-C chemokine receptor type 6-like; Belongs to the G-protein coupled receptor 1 family.	C-C chemokine receptor type 6-like; Belongs to the G-protein coupled receptor 1 family.	0.900
LOC106575202	cd99	ENSSSAP00000066362	ENSSSAP00000109929	CD99 antigen-like protein 2 isoform X2.	CD99 molecule isoform X1.	0.901
LOC106598943	ENSSSAP00000092551	ENSSSAP00000102233	ENSSSAP00000092551	Artemin-like.	Artemin-like.	0.407
LOC106600142	LOC106572824	ENSSSAP00000051617	ENSSSAP00000088755	C-C motif chemokine 20-like.	C-C chemokine receptor type 6-like; Belongs to the G-protein coupled receptor 1 family.	0.957
LOC106600142	ccr6	ENSSSAP00000051617	ENSSSAP00000106122	C-C motif chemokine 20-like.	C-C chemokine receptor type 6; Belongs to the G-protein coupled receptor 1 family.	0.957
LOC106600142	rtn4ip1	ENSSSAP00000051617	ENSSSAP00000015624	C-C motif chemokine 20-like.	C-C chemokine receptor type 6-like; Belongs to the G-protein coupled receptor 1 family.	0.957
LOC106602884	LOC106560694	ENSSSAP00000057570	ENSSSAP00000077885	Junctional adhesion molecule A-like.	Junctional adhesion molecule A-like.	0.901
ccr6	CCL19	ENSSSAP00000106122	ENSSSAP00000092858	C-C chemokine receptor type 6; Belongs to the G-protein coupled receptor 1 family.	C-C motif chemokine.	0.526